Sulfuracidifex tepidarius: IC006_1774
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Entry
IC006_1774 CDS
T06394
Name
(GenBank) hypothetical protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
step
Sulfuracidifex tepidarius
Brite
KEGG Orthology (KO) [BR:
step00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
step03016
]
IC006_1774
Enzymes [BR:
step01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
IC006_1774
Transfer RNA biogenesis [BR:
step03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
IC006_1774
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
F-112
Sen15
Motif
Other DBs
NCBI-ProteinID:
BBG24455
UniProt:
A0A510E3X3
LinkDB
All DBs
Position
complement(1581365..1581742)
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AA seq
125 aa
AA seq
DB search
MSDHIENVKREEDIFQKLINRKEIRAEDISGINWDRLAVYVDLKQKGKVVCKGYDDSTLI
IKDRKIEGKSKAIILVINEAEKISPTKLLDVISRSKSLNLEVLVALVDKYGDITYYNISE
ARLIR
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaccatatcgaaaatgtaaaaagagaggaagacatctttcaaaaacttataaac
aggaaagaaattagggcagaggatatctcagggataaactgggatagactagcggtctac
gtagatcttaaacagaaaggaaaggttgtttgtaaagggtatgatgattcgacccttata
attaaagataggaaaattgaaggtaagagcaaagcgataatacttgtgataaacgaggcg
gagaaaatatctccaacaaaacttttagatgttatctcgaggtctaagtctctaaaccta
gaagtactagtcgcactcgtggataaatacggagatatcacttattataatataagcgag
gcaaggctaattagataa
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