Sulfuracidifex tepidarius: IC006_1878
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Entry
IC006_1878 CDS
T06394
Name
(GenBank) VCP-like ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
step
Sulfuracidifex tepidarius
Pathway
step04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
step00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
IC006_1878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
step03019
]
IC006_1878
03009 Ribosome biogenesis [BR:
step03009
]
IC006_1878
04131 Membrane trafficking [BR:
step04131
]
IC006_1878
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
step04147
]
IC006_1878
Messenger RNA biogenesis [BR:
step03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
IC006_1878
Ribosome biogenesis [BR:
step03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
IC006_1878
Membrane trafficking [BR:
step04131
]
SNARE
SNARE associated proteins
Others
IC006_1878
Autophagy
Aggrephagy
Other aggrephagy associated proteins
IC006_1878
Exosome [BR:
step04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IC006_1878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_22
TIP49
AAA_2
AAA_5
AAA_33
AAA_14
IstB_IS21
AAA_28
nSTAND3
Mg_chelatase
RNA_helicase
AAA_18
ATPase_2
AAA_24
ABC_tran
Parvo_NS1
AAA_3
NPHP3_N
DUF815
AAA_17
Sigma54_activat
Vps4_C
AAA_7
TsaE
NACHT
ATP-synt_ab
NB-ARC
ATPase
AAA_25
Bac_DnaA
PhoH
SPT16
UFD1_N2
Motif
Other DBs
NCBI-ProteinID:
BBG24553
UniProt:
A0A510DWF2
LinkDB
All DBs
Position
complement(1672623..1674917)
Genome browser
AA seq
764 aa
AA seq
DB search
MSASEEQRPPRRELVLKVTEARQKDVGRGKVRIDIELLAQIDVQPGDVVEIEGTRKTAAI
AWHLSQDDMIGERDIIRMDGITRKNSGVSIGDKVIVRKAVVKQASMVKLAPSNFSISVDP
GFVSYVKKRLKEFPLVEGDTVLIPVLGQAIPFTVVQVKPAGIVIVNDETIINISDKPVEQ
TKYPRVTYEDIGGLREIIEKVRELVELPLRHPELFKRLGIEPPKGILLYGPPGVGKTLLA
KAIANETDAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFVDEIDAIAPKRDE
VIGEVERRVVAQLLTLMDGLENRGNVIVIAATNRPNAVDPALRRPGRFDREIEIPLPDKQ
GRMEIFQIHTRNMPLSDDVSLEKLSDMTHGYTGADLASLVREAAMYALRRYLPKIDLNQD
KIPAEVLDSMRVTMDDFMKAFKEIVPSGLREIYIEIPEVKWTDVGGHEELKDELREVVEY
PLKYPEVYEKAGIDPAKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEVLSKWVGES
EKAIREIFRKARMYAPAVIFFDEIDALAPMRGASYDSGVTERLVNQLLAEMDGVEKLENV
IIIAATNRPDILDPALLRPGRFEKLLYVPPPDVSSRKDILRVHSRGIPLSPDTDLDEIAN
RTDGYTGADIAALVREAAMRAVRESMRVCIDTATEKCGQNQDCKDKEVRECMKNKVEVRP
KHFGEAMSKIKPSVTQDMIQFYQNWLEKARQQLPKAIVKPSTFT
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgctagcgaagagcaaaggcctcccaggagggagctagttcttaaggttacagaa
gctagacagaaagacgtcggcaggggaaaagtaagaatagatattgagctacttgcacaa
atcgatgtacagcccggtgacgtagtcgagatagaaggaacaaggaagacagctgcaata
gcgtggcatttgagccaggacgatatgataggggaaagggatataatcaggatggatgga
ataactaggaagaactcaggcgtttccataggagacaaggtaatagtcagaaaggcagta
gtcaaacaagcgtctatggttaaattagccccatccaatttctccattagtgttgaccca
ggtttcgtaagttatgtaaagaagaggctgaaggaatttcctttggtggaaggtgatact
gtactcatacccgtcttagggcaagccatcccattcaccgttgtacaagtcaaacctgca
ggaatagtcattgtaaatgatgaaacgataattaacatatccgataaaccagttgaacaa
actaagtatcctcgtgtgacatacgaggatataggaggtttaagggaaataattgagaaa
gtaagggaactcgtggagttgcctttaaggcatccggagctcttcaagagactaggaata
gaaccacctaaaggcattctgctctacggtccaccaggagtaggtaagacgttactggct
aaggctatagcgaatgaaactgacgcttactttacctccataaacgggcctgaaataatg
agcaagttctacggagaaagcgaacaaagactgagggaaatatttgaggacgcaaagaaa
cacgcgcctgcaataatatttgtagatgaaatagatgcaatagcacctaaaagggatgaa
gtgataggcgaagtagaaagaagggttgtagcacagctcctgacactcatggacggtcta
gagaataggggtaacgtaatagtaatagctgctactaacagacccaacgcggtggatcca
gcactaaggaggcctggtagatttgatcgtgaaattgaaatacctctcccagacaagcag
ggaaggatggagatcttccagatacataccagaaacatgcctctatctgacgacgtaagc
ttggagaaactcagcgatatgactcacggttacactggtgcggatctggcatcattagtg
agggaagctgcaatgtacgctctgaggagatatctccctaagatcgacctaaaccaggac
aagatacctgctgaagtacttgactctatgagagtcacaatggacgacttcatgaaggcc
ttcaaagaaatagttccgagtgggcttagagaaatttacatagaaatccctgaagtaaag
tggacggacgtaggaggacacgaggagctcaaggatgagttaagggaagtagtagaatac
cctctgaaataccctgaagtatatgagaaggcaggaatagatccagctaagggtatactt
ctcttcggacctccaggaaccggtaaaaccatgctagcaaaagcagtagcaacggagagt
ggtgctaatttcatagctgttagaggtcctgaggtactttcaaaatgggtaggtgaaagc
gagaaagcaatcagagaaatatttagaaaagctagaatgtacgctcctgcagttatcttc
ttcgatgaaatcgacgcgctagcaccaatgagaggagcgtcctacgatagcggagtaacg
gaaagattagtaaaccaattattggcggagatggatggagtagaaaaactggaaaacgtg
attataatagctgctaccaatagaccagacatacttgacccagcactattgaggcccggt
agatttgaaaaattgctatacgtacctcctccagatgtcagctcaaggaaagatatccta
agagttcatagcagaggtatacctttaagccctgatactgacctagatgaaatagctaat
agaactgatggatatacgggagcagatatagctgcgctagtaagagaggccgcaatgagg
gctgtaagagagtcaatgagagtatgcatcgatactgcaacagagaagtgcggacagaac
caggattgcaaagataaggaagtaagagagtgtatgaagaacaaagtagaggtcagacca
aagcacttcggagaggcaatgtcaaagataaagccttccgtaacacaggatatgatacaa
ttctaccaaaactggctagagaaagccagacaacaattacccaaggcgatagtaaagccg
agtactttcacgtga
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