Stenotrophomonas sp. 169: ICJ04_00010
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Entry
ICJ04_00010 CDS
T08645
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
steq
Stenotrophomonas sp. 169
Pathway
steq03030
DNA replication
steq03430
Mismatch repair
steq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ICJ04_00010 (dnaN)
03430 Mismatch repair
ICJ04_00010 (dnaN)
03440 Homologous recombination
ICJ04_00010 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
steq03032
]
ICJ04_00010 (dnaN)
03400 DNA repair and recombination proteins [BR:
steq03400
]
ICJ04_00010 (dnaN)
Enzymes [BR:
steq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ICJ04_00010 (dnaN)
DNA replication proteins [BR:
steq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ICJ04_00010 (dnaN)
DNA repair and recombination proteins [BR:
steq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ICJ04_00010 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
DUF61
Motif
Other DBs
NCBI-ProteinID:
QNR97357
LinkDB
All DBs
Position
1632..2732
Genome browser
AA seq
366 aa
AA seq
DB search
MRFTLQREAFLKPLAQVVNVVERRQTLPVLANFLVQVKDGQLSLTGTDLEVEMVSRIAVE
EAQDGETTIPARKLFEIIRALPDGSRITVSQTGDKITVQAGRSRFTLATLPANDFPSVDE
VEATERVVIGEATLKELIERTAFAMAQQDVRYYLNGLLFDLRGDTLRTVATDGHRLALCE
TDLAKPSGSKRQIIVPRKGVTELQRLLESGDREIELEVGRSHVRVKRDDVTFTSKLIDGR
FPDYEAVIPIGADREVKVDREALRASLQRAAILSNEKYRGIRVEVSPGNLKISAHNPEQE
EAQEEIEAETTVSDLAIGFNVNYVLDALSALRDEFIIVQLRDSNSSALVREASSEKSRHV
VMPLRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcacactgcagcgcgaagcctttctcaagccgttggcacaggtcgtcaacgtg
gtcgaacgccgccagaccctgccggttctggcaaatttcctcgtccaggtcaaagacggg
cagctttcgctgaccggtacggatctggaagttgaaatggtgtcgcggatcgcggttgaa
gaggctcaggacggcgagacaaccattccggcccgcaagttgttcgagatcatccgcgcc
ctgcctgacggcagccggatcacggtctcgcagaccggcgacaagatcaccgtgcaggcc
ggccgcagccggttcacgctcgctaccctgcccgccaatgatttcccgtcggtcgacgag
gtcgaggccaccgagcgtgtagtgatcggcgaagccacgctgaaggagctgatcgagcgc
actgcgtttgcaatggcccagcaggacgtgcggtattacctcaacggtctgctgtttgac
ctgcgtggcgatacgcttcgcacggtggccactgacggacaccgtctggccctgtgcgag
accgacctggccaagcccagcggttccaagcgccagatcatcgtgccgcgcaagggcgtc
accgagctgcagcgtctgctggaaagcggtgatcgcgagatcgagctggaggtgggccgc
agccatgtccgcgtcaagcgcgacgatgtcaccttcacttcgaagctgatcgacggccgg
ttcccggattacgaggccgtgattccgattggcgccgaccgtgaggtcaaagtggaccgc
gaagcactgcgcgcctctctgcagcgtgcggcgatcctgtccaacgagaagtaccgcggc
atccgcgtggaagtctcgccgggcaatttgaagatcagcgcgcacaacccggagcaggaa
gaagcccaggaagaaatcgaagccgagaccacggtctccgatttggcgatcgggttcaac
gtgaattatgtgctggatgccctgtcagcgctgcgcgacgagttcatcatcgtgcagctg
cgtgattcgaactcctccgcactggtccgcgaagccagcagcgagaagtctcgccacgtg
gtgatgccgctgcgtctctga
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