Stenotrophomonas sp. 169: ICJ04_02545
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Entry
ICJ04_02545 CDS
T08645
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
steq
Stenotrophomonas sp. 169
Pathway
steq00521
Streptomycin biosynthesis
steq00523
Polyketide sugar unit biosynthesis
steq00525
Acarbose and validamycin biosynthesis
steq00541
Biosynthesis of various nucleotide sugars
steq01100
Metabolic pathways
steq01110
Biosynthesis of secondary metabolites
steq01250
Biosynthesis of nucleotide sugars
Module
steq_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ICJ04_02545 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ICJ04_02545 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
ICJ04_02545 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ICJ04_02545 (rfbB)
00525 Acarbose and validamycin biosynthesis
ICJ04_02545 (rfbB)
Enzymes [BR:
steq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
ICJ04_02545 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
QNR97818
UniProt:
A0A7H1AN46
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All DBs
Position
600016..601071
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AA seq
351 aa
AA seq
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MPTWLVTGGAGFIGGNFVLEAAARGVKVVNLDALTYAGNLKTLSTLDGDPNHVFVEGDIG
DGALVTRLLAEHKPDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLGLLEAVRDYWKALPA
DKGEAFRFLHVSTDEVYGTLGETGKFSETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAK
GRVGETYNVGGNSEKQNIEVVQAICALLDERRPRDDGQPRSSQITYVTDRPGHDRRYAID
ASKLKNELGWEPAYTFEQGIGFTVDWYLDNQEWVNGVLDGSYRLQRIGTTA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtgcccacatggcttgtcaccggcggtgccggattcattggcggtaatttcgtcctcgaa
gccgccgcacgcggcgtcaaggtggtcaatctcgatgcccttacctacgcgggcaacctg
aagactctgtccaccctcgatggcgatcccaaccacgttttcgtggaaggcgatatcggc
gacggcgccctggtcacccgcctgcttgcagaacacaagcccgatgccgtactgaacttc
gcggcggaaagccacgtggatcgctcgattgatggcccgggtgctttcattcagacgaac
gtggtcggcacgctgggtctgttggaagcggtgcgcgattactggaaggcgctgccggcc
gacaagggcgaggcgttccgtttcctgcacgtgtctaccgatgaggtatacggcaccctc
ggcgagaccggcaagttcagcgaaacgaccccctacgctcccaactcgccgtattcggcc
tccaaggccgcgtcggaccacttggtacgggcattccaccacacctacgggctgccggtg
ctgaccaccaattgttcgaacaattacggcccgtaccacttcccggagaagttgatcccg
ctggtgatcgccaaggcgctggccggtgagccgctgccggtgtatggcgatggcaagcag
gtgcgtgattggttgttcgtgtccgaccattgcgaggcgattcgcaccgtgctggcgaag
gggcgcgtcggtgagacctacaacgtaggcggcaactccgagaaacagaatattgaagtg
gtgcaggccatctgcgcgctgctggatgaacgccgtccgcgcgatgacggccagcctcgc
agcagccagatcacctacgtcaccgaccgcccgggccacgaccgtcgctatgcgatcgat
gcctccaagctgaagaacgagctcggttgggagccggcgtacacattcgagcagggcatc
ggcttcaccgtcgactggtatctggataaccaggaatgggtgaacggtgtactggatggc
agttatcggctgcagcgcatcggcaccaccgcctga
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