Stenotrophomonas sp. 169: ICJ04_04660 Help Entry ICJ04_04660       CDS       T08645                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism steq  Stenotrophomonas sp. 169 Pathway steq02020   Two-component system steq02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:steq00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     ICJ04_04660  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     ICJ04_04660  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:steq03021]     ICJ04_04660 Transcription machinery [BR:steq03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      ICJ04_04660 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_IclR HTH_AsnC-type HTH_Crp_2 HTH_23 Sigma70_r4 Sigma70_r4_2 HTH_11 HTH_Tnp_ISL3 HTH_36 Motif Other DBs NCBI-ProteinID:  QNR98208 UniProt:  A0A7H1AP86 LinkDB All DBs Position complement(1111430..1112878) Genome browser AA seq 482 aa AA seqDB search MKTRLQTSLGQHLVMTPQLRQAIRLLQMSTTELDVEIAEAVETNPLLDWDDSPERTPGSE VGSSEAPAGQDAPADSGAPSADAGGDDDWTPAEVDWSGSGSSSGSFDEDDLGSAAERVAD TETLADHLLWQLHLSPLSSRDRNIGAALIDAIEDDGYLREAFSGIAETLLPDIHAGDDEI LTVLHQIQRFDPVGVGARTLGECLQLQLDVLPLDTPALALARRIAGGPLERLPRSGVAGI AQELKQPVADVDAAVTLLRSLDPRPGTQIAAVAQDTYVVPDVVIWRQAGVWRAALAGHAG PKVVIHRGYESLIRRCGEADAGYLKAHLQEARWLLKGLEARGETLLRVVGSLLQHQAGFL EFGAQALRPLTLREIAGELGLHESTISRAIARKHVRTPRGTLPLRAFFASGIDTDGGGEA SSTAIQSMIRKLIDDENPRKPLSDAKLADLLKTSGIPVARRTVAKYREAMNISASHERVR IA NT seq 1449 nt NT seq  +upstreamnt  +downstreamnt atgaaaacgcggttgcagacatcgctggggcagcatctggtcatgacgccgcagctgcgc caggccatccggctgctgcagatgtcgacgaccgagctggatgtcgaaatcgccgaagca gtggaaaccaatccgctgctggactgggacgacagcccggagcggacgcccggcagcgaa gtaggcagcagtgaagcacctgccggtcaggacgcaccggcagacagcggggcgccgtcc gcggatgccggtggcgatgatgactggacgcccgcagaagtggactggagcggctcgggc agcagcagcggctcgttcgatgaagatgacctgggcagcgccgccgagcgggttgccgat accgaaaccctcgccgatcacctgctgtggcaactgcatctttcgccgctgtccagccgc gaccgcaacatcggtgccgcactgatcgatgcgatcgaagacgacggctacctgcgggaa gcattttccggcatcgccgaaacgctgctgcccgacatccatgcgggcgacgacgaaatc ctgaccgtcctgcatcagatccaacgctttgatccggtcggcgtgggggcgcgcacactg ggcgaatgcctgcagttgcagctggatgtactgcccttggacacaccggcgcttgcgctg gcccggcgcatcgccggcggcccgctggagcgcctgccgcgcagcggcgtagccggtatc gcacaggagctgaaacaacccgtggccgacgtggacgcggcggtgacgctgctgcgttcg ctggatccgcgcccaggcacgcagatcgccgctgtggcacaggacacctatgtcgtgccg gatgtcgtcatctggcgacaggccggcgtatggcgggccgcgctggccggtcacgccggg cccaaggtggtcatccaccggggctacgagagcctgatccgccgctgtggcgaagcagat gccgggtacctgaaagcccacctgcaagaggcacgctggcttttaaaggggctggaggcg cgcggcgagaccctgctgcgggtagtcggcagcctgctgcagcaccaggccgggttcctg gagttcggcgcacaggcactgcgcccgctcaccctgcgcgaaatcgccggagagctcggc ctgcacgaatccaccatctcgcgcgccatcgcccgcaagcacgtgcgcacgccacgcggc accttgccgctgcgtgccttcttcgcctccggcatcgataccgacggcggcggggaggcg tccagtacggccatccagtcgatgatccggaaactgatcgacgatgagaacccgcgcaag ccgctttctgacgccaagctggctgacctgctgaaaacctcgggtatcccggtagcgcgc aggaccgtggcgaagtatcgtgaagccatgaacatttccgcctcgcacgaaagagtcaga atcgcttga

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