Stenotrophomonas sp. 169: ICJ04_06200
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Entry
ICJ04_06200 CDS
T08645
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
steq
Stenotrophomonas sp. 169
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
steq03019
]
ICJ04_06200 (rng)
03009 Ribosome biogenesis [BR:
steq03009
]
ICJ04_06200 (rng)
Messenger RNA biogenesis [BR:
steq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ICJ04_06200 (rng)
Ribosome biogenesis [BR:
steq03009
]
Prokaryotic type
rRNA processing factors
ICJ04_06200 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
CHP02642
TLP1_add_C
DUF5351
DnaJ_CXXCXGXG
Anti-TRAP
Pox_A_type_inc
Motif
Other DBs
NCBI-ProteinID:
QNR98485
LinkDB
All DBs
Position
1442528..1444015
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AA seq
495 aa
AA seq
DB search
MSEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEV
GLDRAAFLHANDVVRPAPVASPDTDGTTLPPPSSVPIVELLRDGQDIVVQVVKDPIGTKG
ARLTTQISIPSRYMVLLPQSKVVGVSARIEDETERARLKTLVTELSAQHGGYGYIVRTNA
EGQPAEAIAEDVAYLSRVWNVVERRGREAASCSVIYEDLSLPLRSVRDLIRKDVDKVKVD
SKETFVQLQAFVAKYMPVLAEKLELYAGDRPIFDMFGVEDEIGRALDKQVPLKSGGYLVI
DQTEAMTTIDVNTGSFVGQRNLEETVYRTNLEAAQAVARQLRLRNLGGIIIIDFIDMVDA
EHRRQVLRTLEKALARDHAKTTVYDFSPLGLVEMTRKRTVESLERQLSETCPQCSGRGSI
KTTETVTYEIFREITRAVRQFEAARLLVIASSKVVARITDEESTAVAELEEFLGKSISFQ
ADDQYLQEQFDVVLL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaaatactggtcaacgtaactccccgcgaaacccgggtagcggtgatcgag
aacggcatgctgcaggagctgcatatcgagcgcggctggcggcgcggtgtggtcggcaac
atctacaagggcaaagtgcagcgggtcatgcccggcatgcaggccgcgttcgtcgaagtg
ggactggaccgcgctgcgttcctgcatgccaacgacgtggtgcggccggcgcccgttgcc
agcccggataccgatggcaccacgctgccgccgccatcgtccgtgccgattgtcgagctg
ctgcgcgacggccaggacatcgtggtccaggtagtgaaggatcccatcggcaccaagggc
gcgcgcctgaccacgcagatcagcattccatcgcgctacatggtgctgctgccgcagtcc
aaggtggtcggtgtctcggcgcggatcgaagacgaaaccgagcgggcgcggctgaagacg
ctggtgaccgagctgtcagcgcagcacggcggctacggctatatcgtgcgcaccaatgcc
gaaggccagcctgccgaggccatcgccgaagacgtggcctacctgtcgcgcgtctggaac
gtggtcgagcgccgtggccgcgaggccgcatcgtgcagcgtgatctatgaagacctgagc
ctgccgttgcggtcggtacgcgacctgatccgcaaggacgtggacaaggtaaaggtcgat
tccaaggaaacgttcgtccagctgcaggcgttcgtcgccaagtacatgccggtgctggct
gaaaagctggagctgtatgccggcgaccgtccgatcttcgacatgttcggggtggaggac
gagatcggccgcgcgctggacaagcaggtgccgctgaagtccgggggctacctggtgatc
gaccagaccgaggcgatgaccaccatcgacgtcaacaccggttcgttcgtcggccagcgc
aatctggaagaaaccgtgtaccgcaccaatctggaggcggcccaggccgtggccaggcag
ctgcggctgcgcaacctgggcggcatcatcatcatcgacttcatcgacatggtggatgcc
gagcatcgtcgtcaggtgctgcgcacgctggaaaaggcgttggcgcgcgaccacgccaag
accacggtctatgatttctcgccgttgggcctggtggagatgacccgcaagcgcaccgtg
gagagcctggagcgccagctttccgagacgtgcccgcagtgcagtggccgcggcagcatc
aagaccaccgaaacggtgacctacgagatcttccgcgagatcacccgcgcggtgcgtcag
ttcgaagcggcgcgcctgctggtgatcgcttcgtcgaaggtcgtggcgcggatcaccgat
gaagaatccacggcagtcgccgagctggaggaattcctcggcaagagcatcagcttccag
gctgacgaccagtacctgcaggaacagttcgatgtggtcctgctctga
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