Stenotrophomonas sp. 169: ICJ04_06335
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Entry
ICJ04_06335 CDS
T08645
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
steq
Stenotrophomonas sp. 169
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
VpsR
AAA
HTH_28
AAA_3
AAA_2
HTH_17
HTH_22
Motif
Other DBs
NCBI-ProteinID:
QNR98511
UniProt:
A0A7H1AQ39
LinkDB
All DBs
Position
complement(1476953..1478290)
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AA seq
445 aa
AA seq
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MAVVSDIQARCAIWFGQPLATERAALAAVGWQVRSVDPLQPQAVGLRGRDQVVGVIDLRQ
IPALALTAVTEWTQRHDHLPLLAVLPSGVSSPPPSWQPLLDACQGHFSLPLEQQALLEQL
AHHPQHTSTDADSPAQRLIGDSPALLATRASLFKFAPVDLPVLVTGETGTGKELAAHALH
AMSARADHRFMAVNCGAIPANLVQSELFGHERGAFTGAAQRRLGLFESASGGTVFLDEVG
DLPLDAQTSLLRVLQEGTIERVGSSQPLRVDVRVLAATHVDLEQAVAQGRFRRDLFYRLN
VLRLAMPALRERSGDVLVLAEHFLRQFRARHPGRARGFSSCARQAMQRFDWPGNVRELLN
RVQRAAIVADGELIEPSDLDLVATLPAAARALLQSAREQVERDLLVQALRENEFNVSACA
RHMQVSRVTVYRLCRKHQVELPAIR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtctctgatatccaggcacgttgcgcgatctggttcggccagccacttgcg
accgagcgggcagcgctggcggcggtcggctggcaggtgcgcagcgtggatcccctgcag
ccgcaggccgtgggcttgcgtggccgggaccaagtggttggcgtcatcgatctccggcag
attcccgctctcgcgctgacggcggtgaccgagtggacgcagcggcacgatcacctgccg
ctgctggccgtgctgccttcaggggtaagcagccctccccccagttggcagccgcttctt
gatgcgtgccagggtcacttcagcctgccgctggaacagcaggcactgcttgagcagctt
gcgcatcatccacagcacaccagcaccgacgccgacagccctgcacagcgccttatcggc
gacagccccgcgctgctggccacccgtgcatcgctattcaaattcgccccggtcgacctg
ccggtcctggtgaccggcgaaaccgggaccggcaaggagctcgccgcacacgcgctgcat
gccatgtccgcgcgcgcggatcatcggttcatggccgtcaactgtggcgcgatcccggcc
aacctggtgcagtcggaactgttcggccacgagcgcggcgcgttcaccggcgcggcgcag
cgacgtctgggcctgttcgaaagcgcgagcggtggcacggtgttcctcgacgaggttggc
gacctgcctctggatgcgcagaccagcctgttgcgcgtgctgcaggaaggcaccatcgag
cgcgtgggcagcagccagccgttgcgggtggatgtgcgtgtgctggcggccacccatgtc
gatctggagcaggccgtcgcccaaggacgcttccgccgcgatctgttctaccgcctcaac
gtgctgcggctggccatgccggccttgcgtgagcgcagcggggatgtgctggtgctggcg
gagcatttcctgcgccagttccgtgcacgccaccccggccgtgcacggggcttcagcagt
tgcgcgcggcaggccatgcaacgcttcgactggccgggcaacgtgcgcgagctgctcaac
cgggttcaacgtgcggcgatcgtggccgacggtgagctgatcgagccgtcggatctggat
ctggttgcgaccctgccggcggctgcgcgtgcgctgctgcagagcgcacgcgagcaggtg
gagcgcgatctgctggtgcaggcgttgcgcgagaatgagttcaacgtctctgcctgcgca
cggcacatgcaggtatcgcgggtgacggtgtatcggctgtgccgcaagcaccaggtggag
ttgcccgcgatacggtga
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