Stenotrophomonas sp. 169: ICJ04_07205
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Entry
ICJ04_07205 CDS
T08645
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
steq
Stenotrophomonas sp. 169
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
steq03009
]
ICJ04_07205
Enzymes [BR:
steq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
ICJ04_07205
Ribosome biogenesis [BR:
steq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ICJ04_07205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QNR98663
LinkDB
All DBs
Position
complement(1664690..1666414)
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AA seq
574 aa
AA seq
DB search
MSDTPRKPSLNKLSLKREATSEQFKLEERLHKVLAQAGLGSRRALEQRIAEGLVKVNGEV
AQTGMSVRSGDRIELDGRGFVATALAEPSRVLVYNKPEGEVTTREDPEGRPTVFESLPAL
KGARWIAVGRLDINTTGLLLATTDGELANAMMHPSFEVEREYVVRVRAPEGQDKVDDNTI
LRLQRGVALEDGPAKFDEVERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRT
RYGKVSLPRELVRGHSVELTTAQVDALRADLKLEEGAPSALTLQPVIGQRRAAKTTVRIG
RDGGRGTAYVNGHNTADEGRELRRFDNVREDRGRGRGGKPGGGFKGGLTVSGEAAAKQSQ
RPFKARPQKNDRGLPEGNPAAFRSWYVPDGVSTGPSGHRNAGPGAARGPGARGPGGPGAR
GPGGPGARGPGARGPGQGGGYGQGQGEGARGGYAKPKSPGAGAGGNRGGQGQGGQGNKHP
YGHPGNAPSFPSDHANPGFSPYGSARPASGNRGPGGNRSAGGPGGNRGPGGPGGNRGPGG
PGGGNRGPGGPGGGNRGPGGPGGNRGRGGGPRGG
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccccccgtaagccttcgttgaacaagctctcgctgaagcgggaagccacc
tccgaacagttcaagctggaagagcgcctgcacaaggtgctggcgcaggccggcctgggc
tcgcgccgcgcgctggaacagcgcatcgccgagggcctggtcaaggtcaatggcgaagtc
gcgcagaccggcatgtccgtgcgcagcggcgaccgtatcgagctggatggccgcggcttc
gtcgccaccgccctggccgagccgtcgcgcgtgctggtctacaacaagccggaaggcgaa
gtgaccacccgcgaagatcccgaaggccgaccgaccgtgttcgagtcgctgccggcactg
aagggcgcacgctggatcgccgtcggccgcctggacatcaacaccaccggcctgctgctg
gcgaccaccgacggtgagctggccaacgccatgatgcacccgtccttcgaagtcgagcgc
gagtacgtggtgcgcgtgcgtgccccggaaggccaggacaaggtcgacgacaacaccatc
ctgcgcctgcagcgcggcgtggcactggaagatggcccggccaagttcgacgaagtcgaa
cgcatcggcggcaccgattcccacgactggttccgcgtggtggtgaaggaaggccgcaac
cgcgaagtccgtcgcctgtgggaatcccagggctgccaggtgagccggctgaagcgcacg
cgctacggcaaggtcagcctgccccgcgaactggtccgtggtcattccgtggagctgacg
accgcacaggtcgacgccctgcgcgccgacctgaagctggaagaaggcgcgccttcggcg
ctgacgctgcagccggtgatcggtcagcgtcgcgctgccaagaccacggtgcgcatcggc
cgtgacgggggtcggggtacggcctacgtcaatggccacaacaccgccgatgaaggccgc
gaactgcgccgcttcgacaacgtgcgcgaagaccgcggccgcggtcgcggcggcaagccg
ggtggcggcttcaagggcggcctgacggtcagcggtgaagcggctgccaagcagtcgcag
cgcccgttcaaggcccgcccgcagaagaacgatcgtggcctgccggaaggcaacccggct
gcgttccgcagctggtatgtgccggacggcgtcagcaccggcccgagtggacaccgcaat
gccggcccgggcgctgcccgcggtccgggtgcccgtggtcccggtggccccggcgcgcgc
ggtcccggtggtccgggtgcccggggtccgggtgcgcgcggtccaggccagggtggcggt
tacggccagggccagggtgaaggcgctcgtggcggttatgccaagccgaagtcgccgggt
gccggcgccggtggcaaccgcggcggccagggccagggtggccagggcaacaagcatccc
tacgggcatccgggcaacgccccgtcattcccgtccgatcatgccaacccgggcttcagc
ccgtacggcagtgcccgtccggccagcggcaaccgtggcccgggcggtaaccgctcggcg
ggtggccccggcggcaaccgggggccgggtggtcccggtggcaaccgcggaccgggtggt
cccggtggcggcaatcgtggtcccggcggccccggtggcggcaatcgcggtccgggtggc
cccggtggcaaccgcggacgtggcggcggcccgcgcggcggctga
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