Stenotrophomonas sp. 169: ICJ04_07980
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Entry
ICJ04_07980 CDS
T08645
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
steq
Stenotrophomonas sp. 169
Pathway
steq02010
ABC transporters
steq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ICJ04_07980
03070 Bacterial secretion system
ICJ04_07980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
steq02000
]
ICJ04_07980
02044 Secretion system [BR:
steq02044
]
ICJ04_07980
Transporters [BR:
steq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
ICJ04_07980
Secretion system [BR:
steq02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
ICJ04_07980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_22
AAA_29
MeaB
AAA_16
SbcC_Walker_B
AAA_18
AAA_30
DUF87
NB-ARC
AAA_21
Zeta_toxin
PRK
Motif
Other DBs
NCBI-ProteinID:
QNR98807
UniProt:
A0A7H1AQY5
LinkDB
All DBs
Position
1849077..1851242
Genome browser
AA seq
721 aa
AA seq
DB search
MSHGNAALSVVGDGVVEGEEISLALRGLVLLAQFHGIAADAGQLAHECASDDARVDDTML
VLLARRLGLKAKINKLSLDRLAMANLPALVFGAEDDAFILARINGEQVLIHDLRTKRPQT
ISFEQLTQRYAGRILQVASRASVLGDLARFDFSWFIPAVVKYRKLLMEVFIVSFFIQLLA
LVTPLFYQVVMDKVLVHRGLTTLDVIAIGLVSIAVFDVVLSGLRTYVFAHTTSKIDVELG
ARLFRHMLALPLAYFESRRVGDTIARVRELENIRNFLTGQALTSVLDLFFTVVFLAVMFY
YSGWLTLIVVLSLPLYALISAGITPVLRKRLNEKFARGADNQSFLVETVSGISTVKAMAV
DPRVTRTWDNQLAGYVSAGFGVTKVATVGQQGVQLVQKLVSVAILFWGAKMVIDGKLSLG
QLIAFNMLSGQVSAPIIRLAQLWQDFQQVGISVERLGDILNTRTELPGSRLALPPIKGRV
TFERVAFRYRPDAPEVLSGIELDIGAGEVIGIVGRSGSGKSTLTKLVQRLYTPERGRVLV
DGQDLALADPAWLRRQLGVVLQENFLFNRSVRENIALSDPGMPLDRVIQAATLAGAHEFI
AALPEGYDTKVGEHGTGLSGGQRQRIAIARALITDPRILILDEATSALDYESEHAVMSNM
RSICKGRTVLIIAHRLSTVRHANRIVVVEKGQIVESGTHDELVMRPGGHYAHLYRLQQGI
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacggaaatgcggcgctgtcggtcgtgggtgatggggtggtcgagggtgaagag
attagcctggcgttacgcgggctggtcctgctcgctcagtttcatggaattgcagcggat
gccggccagttggcgcacgaatgtgcgtcagatgatgcgcgtgtggatgacaccatgctt
gtgttgctcgcacggcggttgggcctgaaggccaagatcaacaagctttccttggatcgg
ctggcaatggcgaacctgcccgctctagtgtttggcgcggaagacgacgcgttcattctg
gcgcggatcaacggtgaacaggtcttgatccacgacctgcgcaccaagcgaccgcagacc
atatcgtttgaacagctaacgcagcgttacgctggccgaatcttgcaggtggcctctcgt
gcttctgtgttgggtgatctggcccgttttgatttcagttggttcatcccagcggtagtc
aaataccggaaattgctgatggaggtattcatcgtctccttcttcatccagctgctggcg
ctggttacgccgctgttctatcaagtggtgatggacaaagtcctcgtgcatcgcggacta
acaacgctggacgtaatcgccatcggcctagtgtcgatcgccgtgttcgacgtagtgctt
agcgggctgcggacttacgtgttcgcgcacacgaccagcaagatcgacgtggaactcggc
gcacgcctgttccggcacatgctggctttgccactggcctatttcgagtcgcgcagggta
ggggataccatcgcgcgggtccgcgagcttgagaacatccgtaacttcctgacggggcag
gcgctgacctcggtcctggacctgttctttaccgtggtgtttctcgcggtgatgttctac
tacagcggctggctgaccctgatcgtcgtgttgtcgctgccgctatatgcgctcatctcg
gcaggcatcacacctgtgctacgaaagcgcctcaacgagaagttcgcacgtggcgccgac
aaccagtcgttcttggtggaaaccgtcagcggtatcagcaccgtcaaagcgatggctgtt
gacccacgcgtgacccgcacgtgggacaaccagctcgctggttatgtgagtgccggcttt
ggggtaaccaaggtagcaaccgtgggccagcagggcgtgcagctggtgcagaagctcgtc
agcgtggcgatacttttctggggcgcgaagatggtcatcgatggcaagctgagcctgggc
cagctgattgcgttcaacatgctgtctggccaagtgtcagctcccattattcgcctggcg
cagctgtggcaggacttccagcaggtgggcatttccgttgaacgcttgggcgatatcctc
aatacccggaccgagctgccgggcagccgccttgcacttccaccgatcaagggccgcgtt
acattcgagcgggtagcgttccgctaccgccccgatgcccccgaggtgctctcggggatc
gagctcgacatcggcgcgggggaagtcatcggcatcgttgggcgttccggctccggcaag
agcacgctgactaagctggtgcaacgtctctacacccccgaacgcggccgcgtgctggtt
gatgggcaggacttggcattggctgatccggcttggctgcgccgccaactcggtgttgtg
ctgcaagagaactttctcttcaaccgcagcgtccgggagaacatcgcgttaagtgacccg
ggcatgcctttggatcgggtgatccaggctgccacactggccggcgcgcatgagttcatc
gcagcactgcccgaaggctatgacactaaggtgggcgaacatggaactgggctgtcgggc
ggccagcgccagcgcatcgcgatcgcgcgagctttgatcaccgatccgaggatcctcatc
ctcgatgaagccaccagtgcgctcgattacgagtccgaacatgcggtgatgagcaatatg
cgttcgatctgcaaggggcgcacggtgctgatcattgcccatcgcctgtccacggtccgc
cacgccaatcggatcgtggtggtggaaaagggacagatcgttgagagcgggacgcatgac
gagttggttatgcgacccggggggcactacgcccacttgtaccgattgcagcagggcatt
gcatga
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