Stenotrophomonas sp. 169: ICJ04_09895
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Entry
ICJ04_09895 CDS
T08645
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
steq
Stenotrophomonas sp. 169
Pathway
steq02020
Two-component system
steq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ICJ04_09895
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ICJ04_09895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
steq03000
]
ICJ04_09895
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
steq02035
]
ICJ04_09895
Transcription factors [BR:
steq03000
]
Prokaryotic type
Helix-turn-helix
Other families
ICJ04_09895
Bacterial motility proteins [BR:
steq02035
]
Flagellar system
Flagellar assembly proteins
Others
ICJ04_09895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
AAA_16
HTH_50
bpMoxR
AAA
TIP49
Motif
Other DBs
NCBI-ProteinID:
QNR95889
UniProt:
A0A7H1AHL7
LinkDB
All DBs
Position
2301592..2303073
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AA seq
493 aa
AA seq
DB search
MSESRILLLDNDAVRAEHTVALLEFMDFNPRWVADAADFSTGRYRQNDWMAVIVGELDDS
DSSASLYQWLGQSSLPPPVLLIDGDAPAFARRHGLHEANVWPLEAPLRHAQMEALLRRAS
LKRLDAEHQAGTVQEQGPTGTGPAVIALRQMIEQVAAFDTTVLVLGESGTGKEVVSRAIH
QRSPRRDGPFVAINCGAIPPDLLESELFGHEKGAFTGALSTRKGRFEMAEGGTLLLDEIG
DMSLPMQVKLLRVLQERSFERVGGNETIRCNVRVIAATHRDLESRIADGKFREDLFYRLN
VFPIDVPALRERLEDLPTLAETIAGQLARTGRGEVRFSPEALQALTAYAWPGNVRELTNL
VERLAVLHPGGTVRVQDLPVRYRADIPTVATPAAPVAANAPEGEERLDLRSFSFHAPGQH
AHAAPAAPAALPDDGLDLRNHMANIELALIHEALERTQGVVAHAAQLLGLRRTTLVEKLR
KYGIERDQPEMTG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtcacggatcctgctgctggacaacgatgccgtccgcgccgagcacaccgtt
gccctgctggagttcatggatttcaatccgcgctgggtcgccgacgcggcggatttttcc
acgggccgttaccgccagaacgactggatggcggtgatcgtcggcgagttggacgacagt
gattccagtgcctcgctgtaccagtggctgggccagagcagcctgccgccgccggtgctg
ctgatcgacggggatgcgcccgccttcgcgcgacgccatggcctgcacgaggccaatgtg
tggccgctggaagcgccgctgcgccatgcccagatggaagcgctgctgcgccgcgcgagc
ctgaagcgactggatgccgaacaccaggccggtaccgtgcaggaacagggacccaccggc
accgggccggcggtcatcgcgctgcggcagatgatcgagcaggtcgccgcgttcgatacc
acagtgctggtgctgggtgaatccggcaccggcaaggaagtggtgtcgcgtgcgatccac
cagcgttcgccgcgccgcgacggcccgttcgtcgcgatcaactgcggcgcgattccgccg
gacctgttggaaagcgaactgttcggtcacgaaaaaggggcgttcacgggcgcactgagc
acccgcaaaggccgcttcgaaatggccgagggcggcacgctgctgctggacgaaatcggc
gacatgagcctgccgatgcaggtcaagctgctgcgcgtgctgcaggaacgcagcttcgag
cgcgtgggcggcaacgaaacgatccgctgcaacgtgcgcgtgatcgcggcgacccaccgc
gacctggaaagccgcattgccgatggcaagttccgcgaggacctgttctatcggctcaat
gtgtttcccatcgacgtaccggccctgcgcgagcgcctggaggatctgccgacgctggca
gaaaccatcgccggccagctggcgcggaccgggcgcggcgaagtgcgtttctcccccgaa
gccctgcaggcgctgaccgcctatgcatggccgggcaatgtgcgtgagctgaccaacctg
gtggagcgcctggccgtgctgcatccgggcggcaccgtgcgcgtgcaggacctgccggtg
cgctaccgcgccgacatcccgaccgtggccacgccggcagcgcccgtcgcggcgaatgcg
ccggaaggtgaggagcgcctggacctgcgcagcttctccttccatgcgcctggccagcac
gcccacgcggcgccggccgccccggccgcactgcccgatgatggcctggacctgcgcaac
cacatggccaacatcgaactggcactgatccatgaagccctggaacggacccagggcgtc
gtcgcccacgccgcccagttgctcggcctgcgccgtaccacgctggtggaaaagctgcgc
aagtacggcatcgaacgcgatcagccggaaatgaccggctga
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