Stenotrophomonas sp. 169: ICJ04_10820
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Entry
ICJ04_10820 CDS
T08645
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
steq
Stenotrophomonas sp. 169
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
steq03032
]
ICJ04_10820
03036 Chromosome and associated proteins [BR:
steq03036
]
ICJ04_10820
03400 DNA repair and recombination proteins [BR:
steq03400
]
ICJ04_10820
DNA replication proteins [BR:
steq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ICJ04_10820
Chromosome and associated proteins [BR:
steq03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ICJ04_10820
DNA repair and recombination proteins [BR:
steq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ICJ04_10820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
PTS-HPr
Motif
Other DBs
NCBI-ProteinID:
QNR96052
UniProt:
A0A7H1AI30
LinkDB
All DBs
Position
complement(2514003..2514308)
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AA seq
101 aa
AA seq
DB search
MTKSELIEILARRQAHLKADDVDLAVKSLLEMMGGSLSAGDRIEIRGFGSFSLHYRPPRL
GRNPKTGESVALPGKHVPHFKPGKELRERVSDVVPQEADPA
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgaactgatcgaaatccttgcgcgccggcaggcgcacctgaaggccgat
gatgtcgatctggcggtgaagtcgttgttggagatgatgggcggctcgttgtcggccggt
gatcgcatcgagatccgcggtttcggcagtttttccctgcattaccgtccgccgcgcctg
ggtcgcaatcccaagaccggtgaatcggtcgccctgccgggcaagcatgtcccgcacttc
aagccgggcaaagagctgcgcgaacgcgtcagcgatgtggtgccacaggaagccgatccg
gcctga
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