Stenotrophomonas sp. 169: ICJ04_10895
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Entry
ICJ04_10895 CDS
T08645
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
steq
Stenotrophomonas sp. 169
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
steq03009
]
ICJ04_10895 (dbpA)
Enzymes [BR:
steq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ICJ04_10895 (dbpA)
Ribosome biogenesis [BR:
steq03009
]
Prokaryotic type
rRNA helicases
ICJ04_10895 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Helicase_C_2
AAA_30
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QNR96066
UniProt:
A0A7H1AI44
LinkDB
All DBs
Position
2533316..2534692
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AA seq
458 aa
AA seq
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MNEFSTLPLSPALQPGLEALGYTTMTAIQARALPPILDRRDVIAQAPTGSGKTAAFGLGL
LQALDPATQRVQALVLCPTRELADQVGKQIRKLATGIPNMKLLVLTGGSPLAPQLASLEA
HHPHVVVGTPGRVQELARKRALNLGQVRTLVLDEGDRMLDMGFEEPIREIAGRTHKDRQT
MLFSATFPDAIRAIGRDVLREPVEVTVDGADDAPDIRHLFCEVEPAHRQKALAGLLLKYT
PESAVVFCNTRKDVDEVANSLQQFGFSSLALHGDMEQRDREEVLVRFVNRSCNVLVASDV
AARGLDVEDLAAVINYELPTDIETYQHRVGRTGRAGASGMAISLVAGREKSRAEALEAQR
GKPLDWQKTPLATSRPDELPQAAMRTLRIDGGKTDKLRAGDILGALTGDAGLAGKHIGKI
AIYPTRSYVAIARDHANRALGKLEEGKIKGRRFRTRVM
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaattctcgaccctgccgctgagcccggccctgcagcccggcctggaagcgctt
ggctacaccacgatgaccgccatccaggcgcgcgccctgccccccatcctcgaccgccgc
gacgtgatcgcgcaggcgccgaccggcagcggcaagaccgccgccttcgggctgggcctg
ctgcaggcactggatccggccacccagcgcgtgcaggcgctggtgctgtgccctacccgc
gaactggccgaccaggtcggcaagcagatccgcaagctggccaccggcatccccaacatg
aagctgctggtgctgaccggcggctcgccgctggccccgcagctggcctcgctggaagcc
caccacccgcacgtggtggtcggcacccccggccgcgtgcaggaactggcgcgcaagcgt
gcgctgaacctgggccaggtgcgcaccctggtgctggatgagggcgaccgcatgctggac
atgggctttgaagagcccatccgcgagatcgcaggacgcacgcacaaggatcggcagacg
atgctgttctcggccaccttccccgatgcgatccgcgcgatcggccgcgacgtgctgcgc
gaaccggtggaagtgaccgtggacggtgccgacgacgcccccgacatccgccatctgttc
tgcgaagtagagccggcgcatcggcagaaggcgctggccggcctgctgctgaagtacacc
ccggaatcggcggtggtgttctgcaatacccgcaaggatgtcgacgaggtcgccaactcg
ctgcagcagttcggcttctcgtcgctggccctgcatggcgacatggagcagcgcgaccgc
gaggaagtgctggtgcgcttcgtcaaccgcagctgcaacgtgctggtggccagtgacgtg
gctgcgcgcggactggacgtggaagatctggctgcagtgatcaactacgaactgccgacc
gacatcgagacctaccagcaccgcgtgggccgcaccggtcgcgccggcgccagcggcatg
gcgatcagcctggtcgcgggccgcgagaagtcgcgcgccgaggcactggaagcgcagcgt
ggcaagccgctggactggcagaaaaccccgctggccacctcgcgcccggatgaactgccg
caggccgccatgcgcaccctgcgcatcgacggcggcaagaccgacaagctgcgtgcaggt
gacatcctgggcgcactgaccggcgatgccggactggcgggcaagcacatcggcaagatc
gcgatctatcccacgcgctcctacgtggcgatcgcccgcgaccacgccaaccgcgcactg
ggcaagctggaagaaggcaagatcaagggccgccgcttccgcacccgggtgatgtaa
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