Stenotrophomonas sp. 169: ICJ04_11240
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Entry
ICJ04_11240 CDS
T08645
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
steq
Stenotrophomonas sp. 169
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
steq03400
]
ICJ04_11240
Enzymes [BR:
steq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ICJ04_11240
DNA repair and recombination proteins [BR:
steq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ICJ04_11240
Prokaryotic type
ICJ04_11240
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QNR96127
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All DBs
Position
complement(2606321..2607727)
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AA seq
468 aa
AA seq
DB search
MSSALVWFRRDLRLADNPALQAALESGHDIVPVYIHAPHEEGRWAPGAASNAWRHRSLLA
LDDDLRARGSGLVLREGDSLAVLQELIAETGAEAVFWNRKYEPATQPRDALIKRTLREQG
LQADSCNGSLLFEPWDLQTKQGGPYKVFTPFWRNALSQWRLHAVSDAPASLPAHTVKGLT
LDALGLQPSLGWDAGFWEHWQPGEAGAREALTVFVDGALNGYREQRDLPDRVGTSMMSPH
LHFGEIAPWRIVHALEAERTASRSADIDAYIRQLGWRDFGHHLLHHFPGTTDENLNPRFD
SFRWASPAAADLQAWQRGNTGVPIVDAGLRQLWHTGIMHNRVRMIVASYLCKHMRAHWLE
GARWFWDTLVDADLANNTMGWQWVAGTGADAAPYFRVFNPVTQSEKFDPQARYITRWVPE
LAALPVKARFAPWQHADLLAAKAPDYPRRPLVGLAEGRDAALAAYRRT
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
gtgtcatcagccttggtgtggtttcgccgtgatctccgccttgccgacaatccggcgctg
caggctgcgctggagtccgggcacgatatcgtgccggtctacatccatgcgccgcacgag
gaaggccgctgggcgcccggtgcggcgtccaatgcgtggcggcaccgctcactgttggcg
ctggacgacgatctgcgcgcacgcggctcgggccttgtgctgcgcgaaggcgacagcctg
gcggtcctgcaggaactgatcgccgagaccggcgcggaggcggtcttctggaaccgcaaa
tacgaacccgccacccagccgcgcgatgccctgatcaagcgcaccctgcgcgagcagggg
ctgcaggcggacagctgcaacggcagcctgctgttcgaaccgtgggacctgcagaccaag
caggggggaccgtacaaggtcttcaccccgttctggcgcaatgcgctgagccagtggcgt
ctgcatgccgtgagcgatgcaccggcgtcgctccccgcccacacggtcaagggtctgacg
ctcgatgcgctcggcctgcaaccctcgctgggctgggatgcaggcttctgggagcactgg
cagcccggtgaggccggtgcccgcgaagcactgaccgtgttcgtcgatggggcgttgaac
ggctatcgcgagcagcgtgacctgccggatcgcgtcggcacgtccatgatgtccccgcac
ctgcacttcggcgagatcgcgccgtggcggatcgtccacgcgctggaggccgagcgcacc
gccagccgcagcgccgacatcgatgcgtacatccggcaactgggctggcgtgacttcggc
caccacctgctccatcacttccccgggaccacggacgaaaacctcaacccgcgcttcgac
agcttccgctgggcgtcgcccgcggcggccgacctgcaggcatggcaacgtggcaacacc
ggcgtgccgatcgtcgatgccgggctgcggcagctgtggcacaccggcataatgcacaac
cgcgtacgcatgatcgtcgccagctacctgtgcaagcacatgcgcgcgcactggctggag
ggcgcgcgctggttctgggacaccctggtggatgcggacctggccaacaacaccatgggc
tggcagtgggtggccggcaccggcgccgatgccgcgccgtatttccgcgtgttcaatccg
gtcacccagtcggagaagttcgatccgcaggcgcgttacatcacccggtgggtgcccgag
ttggccgctctgccggtgaaggcgcgttttgccccctggcagcacgccgatctgctggcg
gccaaggcaccggattatccgcggcggccgttggtgggtcttgccgaaggtcgtgacgcg
gcgttggctgcctatcggcgcacttga
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