Stenotrophomonas sp. 169: ICJ04_12790
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Entry
ICJ04_12790 CDS
T08645
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
steq
Stenotrophomonas sp. 169
Pathway
steq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ICJ04_12790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
steq03000
]
ICJ04_12790
03400 DNA repair and recombination proteins [BR:
steq03400
]
ICJ04_12790
Enzymes [BR:
steq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ICJ04_12790
Transcription factors [BR:
steq03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ICJ04_12790
DNA repair and recombination proteins [BR:
steq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ICJ04_12790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
RecR_HhH
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QNR96394
UniProt:
A0A7H1AJ22
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All DBs
Position
2923401..2924876
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AA seq
491 aa
AA seq
DB search
MTSSAALDTASCERARLARDARFDGLFFTAVRSTGIYCRPVCPAPAPKPSNVTYYANAAA
AAAAGYRPCLRCRPELSPAAQQRIDEDAVRRALDLIHDGFLQGATVAALSARVGVSARQL
QRLFVAALGVTPQQLHANQRLLQAKQLLTETRLPVTDVALAAGFNSLRRFNDAFLGGCGM
PPTSIRRLPAPASSAGDAVQLRLGYRPPLDFGLMLRFLQRRMIPGIERIDDDGYQRVIGP
AQRPALLQVSASPGRNELVLRLERIDPRQIPAVVRRVRHMFDLDADLHQVHAALQAEPLL
AQGIAQRPGLRVPGGWEGFEVAVRAVLGQQVSVAAATTLARRLVHAHGHPLDGMPDGLDR
LFPEPARLADAPLEAIGLPRTRASTLRSLARACAEGQLDFGAGQRLEDFVQRCIALPGIG
PWTAQYIALRALGQPDAFPAGDLVLQQMLGTPEKRLTERQTEQRSQPWRPWRAYAVLHLW
HLSPPFRGAPS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacatcctctgccgctctggacactgcaagctgcgaacgtgcgcgactggcccgcgat
gcgcgtttcgacgggctgtttttcacggccgtccgcagcaccggcatctattgccgcccg
gtgtgcccggcgccggcgccgaagccgtccaacgtgacctactacgccaacgcggccgct
gccgctgcggccggctatcggccctgcctgcgctgccggccggagctgtcacccgcggcg
cagcagcggatcgacgaggacgccgtgcggcgggcgctcgatctgatccatgacggcttc
ctgcagggcgcaacggtggccgcgctgtccgcgcgggtgggtgtcagcgcgcggcagctg
cagcggctgttcgtcgctgcgttgggcgtgacgccgcagcaactgcatgccaaccagcgc
ctgctgcaggccaagcagctgctgaccgagacgcgcctgccggtgaccgatgtggcgttg
gccgccggtttcaacagcctgcggcggttcaatgatgcgtttctgggtggctgcggcatg
ccgcccaccagcatccgccgcctgcctgcccccgcctccagtgcgggcgatgccgtgcaa
ctgcgcctgggatatcggcctccattggatttcggcctgatgctgcggttcctgcagcgc
cggatgattcccgggattgaacgcatcgacgacgacggctaccagcgggtgatcggccct
gcgcagcgccctgccctgctgcaggtcagcgcgtcgcccgggcgcaacgaactcgtgctg
cggcttgagcgcatcgatccgcgacagattccggccgtggtccgccgcgtacgccatatg
ttcgacctggatgccgatctgcatcaggtccacgcggcgctgcaggcagagcccctgctt
gcacagggcatcgcgcagcgtccggggttgcgcgttcccggcggctgggaagggtttgaa
gtggcggtgcgcgcggtgctcggccagcaggtcagcgtcgccgcggcaaccacgctggcg
cgtcggctggtgcacgcccatgggcacccgctggacggcatgcccgacggattggatcgc
ttgtttccagaacccgcacgactggccgatgcgccgctggaggccatcggcctgccacgt
acccgtgcatcgacactgcgttcgctggcccgtgcctgcgccgagggtcagctcgacttc
ggtgcagggcaacggcttgaggatttcgtccagcgttgcatcgccctgcccggcatcggt
ccgtggacggcgcagtacattgcgctgcgcgcgctgggccagcctgatgcgtttcccgcc
ggtgacctggtgctgcagcagatgctgggcacgcccgaaaagcgactgaccgaacgccag
accgagcaacggtcgcagccgtggcggccctggcgcgcctatgccgtgctgcacctctgg
cacctctctcctcctttccgtggagctccgtcatga
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