Stenotrophomonas sp. 169: ICJ04_13010
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Entry
ICJ04_13010 CDS
T08645
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
steq
Stenotrophomonas sp. 169
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
steq03000
]
ICJ04_13010 (prpR)
Transcription factors [BR:
steq03000
]
Prokaryotic type
Helix-turn-helix
Other families
ICJ04_13010 (prpR)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_lid_14
AAA_5
HTH_8
Mg_chelatase
AAA_lid_BCS1
AAA_16
HTH_23
Hydrolase
HTH_Tnp_1_2
ATPase
HTH_17
nSTAND3
HTH_64
ketoacyl-synt
HTH_11
HTH_10
AAA_2
HVO_A0261_N
Arm-DNA-bind_2
AAA
Motif
Other DBs
NCBI-ProteinID:
QNR99167
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Position
2983238..2984815
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AA seq
525 aa
AA seq
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MHLPRLPFVAAEADPSRPVIWTVSVSRLTGLLGDVIPEFDRRARIEQINLGFEEAVAVIN
QRLRQEHCDVVIAGGSNAAWLRSRLDVPLVPIQANGFDLMEALARARRIAPRIGLVTHAS
DVPTFGSFQDSFGLQIEHRRFVTREDARDCIADLRANGIEVIVGTGMAIDHAEAAGLQGV
LLYSADSVRQAFEHALELTHTLARSVTRTARIPRRSSPPGHGQVLLGDSRVMQDVRKQIA
LYAPHDSTVLVSGETGTGKELVARQLHADSVRRGRFVALNCGAISESLLESELFGYSDGA
FTGARRGGRIGLVEAADGGTLFLDEIGELPLPLQTRLLRVLEEREVLRVGSTEPTPVNLR
VVAATLQSLEQRVQMGLFRRDLYYRLATLRIALPALRVRRDDIPLLARAFFQQLRGLDAP
LDEDAMVALAAADWPGNVRELRNLMDRLRIHWQPSDGPVSRARLLELAPELGDAAAAGAI
VPGRPSPAHLQQLLATHRHDREGMAQALGISRTTLWRWLRAAGLA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgccacgcctccccttcgttgccgccgaggccgatccctcccgaccggtcatc
tggaccgtgagcgtgtctcgcctgacgggattgctcggcgatgtgatcccggagttcgac
cgccgcgcgcgcatcgaacagatcaacctcggcttcgaagaagccgtggccgtgatcaac
cagcgcctgcgccaggagcactgcgatgtagtgatcgccggcggctccaacgccgcttgg
ctgcgcagccggctggatgtgccgctggtgccgatccaggccaacggcttcgacctgatg
gaggcgctcgcacgggcacgacgcatcgcacctcgcatcgggctggtcacccacgccagt
gacgtgcccacgttcggcagcttccaggacagcttcggcctgcagatcgaacaccgccgc
ttcgtgacccgggaagatgcgcgcgattgcatcgcggacctgcgcgccaacgggatcgag
gtcatcgtcggcaccggcatggcaatcgatcacgccgaagccgccggtctgcagggcgta
ctgctgtattcggctgattcggtgcgacaagcgttcgagcatgccctggaactgacgcat
accctggcgcgctccgtgacccgcaccgcgcgcattccccggcgcagcagcccgccgggc
cacgggcaggtgctgctcggcgacagccgggtgatgcaggacgttcgcaagcagattgcc
ctgtatgccccacacgacagcacggtactggtcagcggcgagaccggcaccggcaaggag
ctggtagcccgtcagttgcatgcggacagcgttcgtcgcggacgtttcgtcgcactcaac
tgcggtgccatcagcgagtcgctgctggaatccgaactgttcggctacagcgacggtgcc
ttcaccggcgcccgccgcggcggacgtatcggcctggtggaagctgcggatggcggcacc
ttgttcctggatgaaatcggcgaactgccgcttccgctgcagacgcggctgttgcgggtc
ctggaagagcgcgaggtgttgcgggtgggctcgaccgaaccgacgccggtcaacctgcgg
gtagttgcggcgacgctgcaatcgctggagcagcgggtgcagatgggcctgttccgtcgc
gatctgtattaccggctggcgacactgcgcatcgccctgcccgccctgcgcgtgcggcgc
gacgatatccccttgctggcacgcgcgttcttccagcaactgcgaggcctggacgctccc
ctggatgaggatgccatggtggcgctcgccgccgccgactggcccggcaacgtgcgcgaa
ctacgcaatctgatggaccgcctgcggattcactggcagcccagcgacggtcccgtcagc
cgtgcacggctgctggagctcgcccccgaactgggcgacgcagcggccgccggcgccatc
gtgccggggcgtccctcgccggcccacctgcagcagttgcttgccacccatcgccatgat
cgcgaaggcatggcccaagcactgggcatctcgcgcaccaccctgtggcgctggctgcgg
gcggcaggattggcgtaa
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