Stenotrophomonas sp. 169: ICJ04_13400
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Entry
ICJ04_13400 CDS
T08645
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
steq
Stenotrophomonas sp. 169
Pathway
steq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ICJ04_13400 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
steq03019
]
ICJ04_13400 (recQ)
03400 DNA repair and recombination proteins [BR:
steq03400
]
ICJ04_13400 (recQ)
Enzymes [BR:
steq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ICJ04_13400 (recQ)
Messenger RNA biogenesis [BR:
steq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ICJ04_13400 (recQ)
DNA repair and recombination proteins [BR:
steq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ICJ04_13400 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QNR96506
UniProt:
A0A7H1AJD4
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All DBs
Position
3091049..3092857
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AA seq
602 aa
AA seq
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MPSSPAHELLRRVFGYDDFRGPQRDIVEHVAAGHDALVLMPTGGGKSLCYQVPALLRDGC
GIIISPLIALMQDQVEALRQLGVRAEFLNSTLDGETAARVERDLLAGDLDMLYVAPERLL
TGRFLSLLSRSRIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPEIPRLALTATADPP
TQREIAERLDLSQARHFVSSFDRPNIRYTVVQKDNARQQLTTFLASHRNEAGIVYCMSRR
KVEETAEFLSSQGFTSLPYHAGLPAEVRANNQRRFLREDGIVMCATIAFGMGIDKPDVRF
VAHTDLPKSMEGYYQETGRAGRDGEPAEAWLCYGLGDVVLLKQMIEQSEAGEERKQLERS
KLDHLLGYCESMQCRRQVLLAGFGETYPQPCGNCDNCLTPPAAWDATVPAQKALSCVYRS
GQRYGVGHLIDILRGSENEKVRQSGHEKLSTYGIGKDLDSRTWRSVFRQLVATSLLEVDT
AGHGGLRLTDASRDVLKGQRQISMRRDSAPSSSRERSTPRSGSGLSVLPQDLMLFNALRT
LRAELAREQNVPAFVIFHDSTLRNIAEQRPTSLDALARVGGIGGTKLARYGPKLIDVVRE
EG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgccttccagtcccgcgcacgagctgctccgccgcgtctttggttacgacgacttccgc
ggcccgcaacgggacatcgtcgagcacgtcgctgccggccatgacgcccttgtcctgatg
cccactggcggtggcaagtcactctgctaccaggtgcccgcgctgctgcgcgacggctgc
gggatcatcatctcgccgcttatcgccttgatgcaggatcaggtcgaagccctgcgccag
cttggcgtgcgcgctgaattcctcaattccaccctggatggcgaaaccgccgcccgcgtg
gagcgcgacctgctggccggcgacctcgacatgctctatgtcgcccccgaacggctgctg
accggacgcttcctgtccctgctctcgcgcagccgcatcgccttgttcgccatcgatgaa
gcccactgcgtatcgcagtggggccacgacttccgccccgaataccgccagctcaccgtg
ctgcacgaacgctggccggaaattccgcggctggccctgaccgccaccgccgatccgccc
acccaacgcgagatcgccgagcgcctggacctgtcccaggcacgccacttcgtcagctcc
ttcgaccggccgaacatccgttacaccgtcgtgcagaaggacaacgcgcggcagcagttg
accactttcctggccagccaccgcaacgaggccggcatcgtctactgcatgtcccggcgc
aaggtcgaggaaaccgccgagttcctgtccagccaaggcttcacctcgctgccctaccac
gccggtctgcccgcagaggtgcgcgccaacaaccagcgccgcttcctgcgcgaagacggc
atcgtgatgtgcgcgaccatcgccttcggcatggggatcgacaaacccgacgtgcgcttc
gtcgcccacaccgacctacccaagtcgatggaagggtattaccaggaaaccgggcgcgcc
ggccgcgacggggagccggcggaggcctggctctgctacggactgggcgacgtggtgctg
ctgaagcagatgatcgagcagtccgaagcaggcgaggagcgcaagcagcttgaacgttcc
aagctggaccacctgctgggctactgcgaatccatgcaatgccgccgccaggtgctgctt
gccgggtttggcgagacctatccgcaaccctgcggcaactgtgacaactgcctgaccccg
cctgccgcctgggacgccaccgtccccgcgcagaaggcgctcagctgcgtgtatcgcagc
ggccaacgctacggcgtgggccatctgatcgacatcctgcgtggcagcgagaacgagaaa
gtgcgccagagcgggcatgaaaaactgagtacctacggcatcggcaaggacctggacagc
cgcacctggcgcagcgtgttccggcagttggtggcgaccagcctgctcgaggtggatacc
gccggccacggcggcctgcgcctcaccgatgccagccgggacgtactcaaaggccagcgg
cagatcagcatgcggcgtgacagcgcgcccagcagcagccgcgaacgcagcaccccgcgc
agcggcagcggtctgtcggtgctgccgcaggacctgatgctgttcaacgcactgcgcacg
ctgcgcgccgagctggcgcgcgagcagaacgtgccagcgtttgtcatcttccatgacagc
acgctgcgcaacatcgccgaacaacggccgacttcgttggacgcgctggcccgcgtgggc
ggcatcggcggtaccaagctcgcacgctatggccccaagctgatcgacgtggtgcgcgaa
gaagggtga
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