Stenotrophomonas sp. 169: ICJ04_13675
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Entry
ICJ04_13675 CDS
T08645
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
steq
Stenotrophomonas sp. 169
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
steq03009
]
ICJ04_13675 (rluD)
Enzymes [BR:
steq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
ICJ04_13675 (rluD)
Ribosome biogenesis [BR:
steq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ICJ04_13675 (rluD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TTC3_9th
DUF4892
Motif
Other DBs
NCBI-ProteinID:
QNR96555
UniProt:
A0A7H1AJI3
LinkDB
All DBs
Position
complement(3155897..3156886)
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AA seq
329 aa
AA seq
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MSDSSAEQARQATVPDTAAGRRFDAVLAELFPEYSRSKLTEWIKSGDVLLDGVTVRGRDP
VRGGEVATLNAVLETQTHAEPEDIPLDVLFEDEHLLVINKPVGLVVHPGAGNSSGTLVNA
LLYRDASVSALPRAGIVHRLDKDTSGVMVIARTIQAQTALVEQLSERQVHRQYLAVVVGA
LVAGGTADAPIDRHPRDRLKMGVREDGKEAITHYRLRERFRAHTALECRLETGRTHQIRV
HMAHLRHAIVGDQLYGGALKLPKGASDELVAALRGFKRQALHAETLEFNHPITGEPVRNT
APAPADMLQLMKALHDDSKAFAERERNRW
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcctctgctgaacaggcccgccaggccaccgtccccgataccgctgcaggc
cgccgcttcgatgcggtgctggccgagctgtttccggaatactcccgctcgaagctgacc
gaatggatcaaatccggcgatgtgctgctggacggggtcaccgtgcgcggacgcgacccg
gtccgtggcggtgaggtcgccaccctgaatgcggtgctggaaacccagacccacgccgag
ccggaagacatcccgctggatgtgctgttcgaggatgagcacctgctggtgatcaacaag
ccggtgggcctggtggtgcatccgggtgccggcaattccagcggcacgctggtcaacgca
ctgctgtaccgcgatgcgtcggtgtcggcactgccgcgcgctggcatcgtgcatcgcctg
gataaagacaccagtggcgtgatggtcatcgcccgcaccatccaggcgcagaccgccctc
gtggagcagttgtccgagcgccaggtgcaccgccagtacctggccgtcgtggtgggggcg
ctggtggccggtggcacggccgatgcgccgatcgatcgccatccccgtgatcgcctgaaa
atgggcgtgcgcgaagacggcaaggaagcgatcacccactaccgcctgcgcgagcggttc
cgcgcgcacaccgcgctggaatgccgtctggagacgggccgtacccaccagatccgtgtg
catatggcgcatctgcgccacgcgatcgtcggtgaccagttgtacggcggtgcgttgaag
ctgccgaagggcgccagtgacgagctcgtcgctgcgctgcgcggattcaagcggcaggcg
ctgcatgccgagacactggaattcaaccacccgatcaccggggagccggtgcgtaacact
gcccccgcgccggcggacatgctgcagctgatgaaagccctgcatgacgacagcaaggct
ttcgccgaacgcgagcggaaccgctggtga
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