Stenotrophomonas sp. 169: ICJ04_13780
Help
Entry
ICJ04_13780 CDS
T08645
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
steq
Stenotrophomonas sp. 169
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
steq03000
]
ICJ04_13780 (soxR)
Transcription factors [BR:
steq03000
]
Prokaryotic type
Helix-turn-helix
MerR family
ICJ04_13780 (soxR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
HTH_17
TetR_N
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QNR96574
LinkDB
All DBs
Position
complement(3180299..3180733)
Genome browser
AA seq
144 aa
AA seq
DB search
MAMQELSVGEVAKRSGVAVSALHFYERKGLIRSLRNAGNQRRYPRDVLRRLAVIRVAQRV
GMPLEAIGAALAELPEGRTPTKAEWARMSARWRSELDERIHLLQFLRDQLTGCIGCGCLS
LKRCWLANPGDVLAEQGEGPQRWE
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcaggagcttagtgtaggcgaggtcgccaagcgcagcggcgtggcggtgtcg
gcgctgcacttctacgagcgcaaggggctgatccgcagcctgcgcaacgcaggaaaccag
cggcgttacccgcgcgatgtactgcggcgcttggcagtgatccgggtggcacagcgggta
ggcatgccactggaagcaatcggtgcggcgttggcagagctgcctgaaggacgcacaccg
accaaggcggagtgggcgcgcatgtccgcgcgctggcgcagcgaactggatgagcgcatc
cacctgctgcagttccttcgcgatcagctgaccggctgcatcggctgcggctgcctgtcg
ctgaaacgctgctggctggccaaccccggcgatgtgctggcagaacagggcgaagggccg
cagcgctgggaatga
DBGET
integrated database retrieval system
