KEGG   Stenotrophomonas sp. 169: ICJ04_14335
Entry
ICJ04_14335       CDS       T08645                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
steq  Stenotrophomonas sp. 169
Pathway
steq03030  DNA replication
steq03430  Mismatch repair
steq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:steq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ICJ04_14335 (dnaQ)
   03430 Mismatch repair
    ICJ04_14335 (dnaQ)
   03440 Homologous recombination
    ICJ04_14335 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:steq03032]
    ICJ04_14335 (dnaQ)
   03400 DNA repair and recombination proteins [BR:steq03400]
    ICJ04_14335 (dnaQ)
Enzymes [BR:steq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ICJ04_14335 (dnaQ)
DNA replication proteins [BR:steq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ICJ04_14335 (dnaQ)
DNA repair and recombination proteins [BR:steq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ICJ04_14335 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: QNR96669
LinkDB
Position
complement(3294087..3294815)
AA seq 242 aa
MRQIILDTETTGLAWQKGNRVVEIGCVELFKRRPSGNHYHQYLKPDVDFEPGAQEVTGLT
LDFLADKPDFAQVAEAFLAFIDGAELIIHNAAFDVGFLDNELSRLGPQFGKITDRCTVVD
TLALARERFPGQRNSLDALCKRLGVDNAHRQLHGALLDAQILGEVYIALTSGQDDLGFDM
DEDGAKRVATMQGFDPAKLLPRPRVQATASELEAHAARLERLRKKAGHAIWDGPKIEEAA
VA
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcgtcagatcatccttgataccgaaaccaccggtcttgcctggcagaagggcaaccgc
gtcgtcgaaatcggctgcgtggagctgttcaagcgccggcccagtggcaaccactaccac
cagtacctgaaaccggacgtggacttcgagcccggcgcgcaggaagtcaccgggcttacc
ctggatttcctggccgacaagccggatttcgcccaggtggccgaggccttcctggccttc
atcgacggcgccgagctgatcatccacaacgctgcgttcgacgtgggcttcctcgacaac
gaactgtcccgcctgggaccgcagttcggcaagatcaccgaccgctgcaccgtggtcgat
accttggcgctggcgcgcgagcgcttccctggccagcgcaattcgctggacgcgctgtgc
aagcgcctgggcgtggacaacgcgcaccgccagctgcacggcgcgctgctcgatgcgcag
atccttggcgaggtctacatcgcgctgacctcgggccaggatgatcttggctttgacatg
gacgaagacggcgccaagcgcgtggccaccatgcagggcttcgacccggccaagctgctg
ccgcgcccgcgcgtgcaggccaccgcctcggaactggaagcccatgccgcccgcctggag
cgcctgcgcaagaaagccggccacgccatctgggatggcccgaagatcgaagaagccgcc
gtcgcctga

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