Stenotrophomonas sp. 169: ICJ04_17615
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Entry
ICJ04_17615 CDS
T08645
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
steq
Stenotrophomonas sp. 169
Pathway
steq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ICJ04_17615 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
steq03400
]
ICJ04_17615 (xth)
Enzymes [BR:
steq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ICJ04_17615 (xth)
DNA repair and recombination proteins [BR:
steq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ICJ04_17615 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QNR97260
LinkDB
All DBs
Position
complement(4024983..4025750)
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AA seq
255 aa
AA seq
DB search
MKIASWNVNSLNVRLPHLEQWLKDAGPDIVGIQETKLEDHKFPDAALASAGYRSVFAGQK
TYNGVALLSREPAEDVQIGIPGFEDEQKRVIAGTFGDLRVINLYVVNGQDVGTDKYAYKL
RWLEAVHAWIETELQKYPKLIVMGDFNIAPDERDVNDPLVWNENHILTSTAERGALNKLL
QLGLHDAFRLHSDEAGIFSWWDYRAAGFRRNLGLRIDLTLVSDALKASAVASGIDREPRT
WERPSDHAPAWVQLG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcctcgtggaacgtcaactccctcaacgtccgcctgccgcacctggagcag
tggctcaaggatgccggtccggacatcgtgggcatccaggaaaccaagctggaagaccac
aaattccccgatgccgcgctggccagtgccggctaccgcagcgtgttcgccgggcagaag
acctataacggcgtggcgctgctgtcgcgtgagccggccgaggacgtgcagatcggcatc
cccggcttcgaggacgaacagaagcgggtgatcgcgggcaccttcggcgacctgcgggta
atcaatctctacgtggtcaacggccaggacgtcggcacggacaaatacgcctacaagctg
cgctggctggaggcggtgcatgcgtggatcgaaaccgaactgcagaagtacccgaaactg
atcgtgatgggggacttcaacatcgccccggacgagcgtgacgtgaacgatccgctggtg
tggaacgaaaaccacatcctgacctcgaccgccgagcgcggggcgttgaacaagctcctg
caactggggttgcacgacgcgttccgcctgcacagcgacgaggccgggatcttcagctgg
tgggactatcgcgccgcgggattccgccgcaatcttggcctgcggatcgacctgaccctg
gtgtctgatgccctcaaggcatccgccgttgcgtcgggcatcgaccgcgagccgcggacc
tgggagcgtcccagcgaccatgcaccggcatgggtgcagctgggttga
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