Sphingopyxis terrae subsp. terrae: AOA14_02640
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Entry
AOA14_02640 CDS
T04307
Name
(GenBank) DNA helicase UvrD
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ster
Sphingopyxis terrae subsp. terrae
Brite
KEGG Orthology (KO) [BR:
ster00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ster03400
]
AOA14_02640
Enzymes [BR:
ster01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOA14_02640
DNA repair and recombination proteins [BR:
ster03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AOA14_02640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AMU93501
UniProt:
A0A142VUT9
LinkDB
All DBs
Position
complement(550633..554100)
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AA seq
1155 aa
AA seq
DB search
MSKSAGLAILDPRQGAAADPESHVWLGASAGTGKTQVLSARVLRLMLDGVSPQAILCITF
TKAGAAEMAHRIHERLATWVRMSDGDLRLDLHALGLDWERPGLMTRARSLFATVIDSPGG
AIRVQTIHSFCQTLLASFPLEAKLLPGFRAIEEDEAAALKRQILGDLLEHDPDREALRAV
AAILSRRLGQESALAFLSSCAAVFGGPRAALPPAAQDLRAAFDLPGGDPDAWLAAEIAGG
AISDADIKAVATSGAAWGTKTGEACSDKMVGWLIAEASARAAMLDELLGCFLTGKGELRA
DFAGDKGRMTDCADSAVRIVDAAGRLRATATAMRVADDLAAGWKLGARFAEAYALAKRDA
GLADFDDLITLAGTLLRVSSFGEWVRFKLDQRTDHILVDEAQDTNMRQWGIVLSLAEEFF
AGVSAKDDRLRTLFTVGDRKQAIFGFQGTDPRAFANARDMFHAMGEMGGQPFRQVDLVSN
YRSTPAVLDVVDRWLGDGGTIAMGLDGEEPPHRPFRSAQAGQVELWAPLPVGKAIDAAAA
EDGGDEGDGSAPASDPASMRLAKAIAGEVQDWIANGKDGRPVAPGDIMILVRRRRDLAAR
IVARLQTLHVPVAGVDRFALTQPLAVQDLIAAMRFAVQPLDDLNLAALLVSPLLGWTQDE
LYARTAKRGRAAIWEHLRSHEETMPPATMAALRALLGMADFTTPFRFLETILSGPIDGRR
KLYARLGREARDPIDELLSQALAFEARETVSLLGFLTRIAGSSADIKRQTEARSDVVRVM
TVHGSKGLQAPIVILADATDDAAIGHRPFTVDVAAWEKLPVFAMPADERQGALAQAYQDA
ADAAAQEHWRLFYVAMTRAEEMLIVAGVTKKPDLSVPETSWHSAAAMALEGLGCDWEDAG
PLWGRRRVHRINDGKWARRDAAVRAAPPPLALPAWTHAPAPEEARPPRPLAPSALGEDDV
AVPPQGAARVAAVTRGLLLHALFERLPPVATDRRRAAALRWLAVQAPTLDDAARMAMADE
VLAILDDPAHAALFGPDSLAEVPLSAVVDGMVVAGIVDRLRVTDDAVTVIDYKTGRRIPG
SAADVAPAYLRQMAAYRDALAVIFPGRRVETALLYTAEPRLIALDDAVLAPHKPGLLAAK
ANLPPPPLEPGAPTS
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaagagcgccggcctcgccatcctcgacccgcggcagggcgccgccgccgatccc
gaaagccatgtctggctcggcgcatcggcggggaccggcaagacgcaggtgctgtcggcg
cgcgtgctgcggctgatgctggacggcgtttcgccgcaggcgatcctgtgcatcaccttc
accaaggcgggcgctgccgaaatggcgcaccgcatccacgaacggctcgcgacctgggtg
cggatgagcgacggcgatctgcggctcgatctccacgcgctggggctcgactgggagcgg
ccggggctgatgacgcgtgcgcgctcgctgttcgcgacagtgatcgacagccccggcggc
gcgatccgcgtccagacgatccacagcttctgccagaccctgctcgccagctttccgctc
gaggcaaagctgcttcccggctttcgcgctatcgaggaagatgaagcagcggcgctgaag
cggcagatactcggcgatctgctcgagcatgatcccgaccgcgaggcgctgcgggcggtt
gcggcgatactgtcgcggcggctggggcaggaatccgcgcttgccttcctgtcgagctgc
gccgcggtcttcggtggcccgcgcgccgcgttgccgcccgcggcgcaggatctgcgcgcg
gcgttcgacctgccgggcggcgatcccgatgcgtggctcgctgccgaaattgcaggcggg
gcgatttccgacgccgatatcaaggcggtcgcgaccagcggggcggcgtggggtaccaag
accggcgaggcttgttcggacaagatggtcggctggctcatcgccgaggcctcggcgcgc
gccgcgatgctcgatgaactgctcggctgtttcctgaccggcaagggcgagctgcgcgcc
gattttgcgggcgataagggccggatgaccgattgtgccgatagcgcggtgcgcatcgtc
gatgccgccgggcggctgcgcgcgacggcgaccgcgatgcgcgtcgccgacgatcttgcg
gcggggtggaagcttggcgcgcgctttgccgaagcctatgcgctcgccaagcgcgatgcg
ggtcttgccgatttcgacgatctcatcacgctcgccgggacgctgctgcgtgtcagcagc
ttcggcgaatgggtgcgcttcaagctcgatcagcgcaccgaccatatcctcgtcgatgag
gcgcaggatacgaacatgcgccagtggggcattgtcctgtcgctcgccgaagagtttttc
gcgggcgtcagcgcgaaggacgaccggctgcggacgctgttcacggtcggcgaccgcaag
caggcgatcttcggctttcagggcaccgaccccagggcgttcgcgaacgcgcgcgacatg
ttccacgcgatgggcgagatgggcggccagcccttccgccaggtcgatctcgtttccaac
tatcgctcgacgcccgcggtgctcgacgtcgtcgaccgctggctcggcgacggcgggacg
atagcgatgggactcgacggcgaagagccgccacaccgtccgtttcgaagcgcgcaggcc
ggccaggtcgaactctgggcgccgctgcccgtcggcaaggcgatcgatgccgcagccgcg
gaggacggcggggacgagggggacggcagcgcccccgcctccgatcctgcctcgatgcgg
ttggccaaggcgatcgcgggcgaggtgcaggactggatcgcgaacggcaaggatggccgc
cccgtggcgcccggcgatatcatgatcctcgtacgccggcgccgcgatctggcggcgcgg
atcgtcgcgcggcttcagacgctgcacgtccccgtcgcgggcgtcgaccgcttcgcgctg
acccagccgctagcggttcaggatctgatcgccgctatgcgcttcgcggtgcagccgctc
gacgatctcaacctcgccgcgctgctcgtgtcgccgctgctcggctggacgcaggacgag
ctttacgcgcgtacggcaaagcgcggccgcgccgccatctgggaacatctgcgctcccat
gaggagactatgccgcccgcaacgatggcggcgctgcgcgcactgctcggcatggccgat
ttcacgacccctttccgctttctcgaaacgatcctctcagggccgatcgacggacggcgc
aagctttacgcgcggctggggcgcgaggcgcgcgacccgatcgacgaactgctgagccag
gcgctggcgttcgaggcgcgcgaaaccgtgtcgctactcggctttctgacccggatcgcg
ggcagcagcgccgatatcaagcggcagaccgaagcgcgcagcgacgtcgtgcgcgtgatg
acggtgcacggatcgaagggcttgcaggcgccgatcgtcattctcgccgatgcgaccgac
gatgccgcgatcggtcatcgtcccttcaccgtcgatgtcgccgcctgggaaaagctgccc
gtcttcgcgatgcccgccgacgagcggcagggtgcgctggcgcaggcctatcaggacgcg
gccgatgccgcggcgcaggagcattggcggctgttctacgtcgcgatgacccgcgccgaa
gagatgctgatcgtcgcgggcgttaccaaaaagcccgacctgtcggtgcccgagacaagc
tggcacagcgcggccgcgatggcgctggaggggcttggttgcgattgggaggatgcgggg
ccgctgtggggccgccgccgtgtccaccgcatcaatgacggcaaatgggcgcgcagggat
gcggctgtgcgcgccgcaccgccgccgctcgcgctgcccgcctggacccacgccccggcg
cccgaggaggcgcgcccgccgcgtccgctcgcgccctcggcgctgggcgaagacgatgtc
gcggtgccgccgcagggggcggcgcgcgtcgcggcggtgacgcgcggcctgctgctccac
gcgctgttcgaacgcctgccgccggtcgcgaccgataggcggcgcgcggcggcgctgcgc
tggctcgcggtgcaggcaccgacgctcgacgatgcggcgcgtatggcgatggcggacgag
gtgctcgccatcctcgatgatccggcgcacgccgcactcttcggccccgacagtctggcc
gaagtgccgctctcggcggtggtcgacggcatggtcgtggcggggatcgtcgaccggctg
cgcgtgacagacgacgcggtgacagtgatcgattacaagaccgggcggcggatacccggg
agcgcggccgatgtcgcgcccgcctatctgcgccagatggcggcctatcgcgatgcgctg
gcggtcatctttccgggccggcgcgtcgaaacggcgctgctctatacggcggagccgcgc
ctcatcgcgctcgacgatgccgtgctggcaccgcacaagcccggcttgcttgccgccaag
gcgaatttgccgccgccgcctcttgagccgggcgccccgacgtcctag
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