Sphingopyxis terrae: AOA14_04615
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Entry
AOA14_04615 CDS
T04307
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ster
Sphingopyxis terrae
Pathway
ster03030
DNA replication
ster03430
Mismatch repair
ster03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ster00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOA14_04615
03430 Mismatch repair
AOA14_04615
03440 Homologous recombination
AOA14_04615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ster03032
]
AOA14_04615
03400 DNA repair and recombination proteins [BR:
ster03400
]
AOA14_04615
Enzymes [BR:
ster01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOA14_04615
DNA replication proteins [BR:
ster03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOA14_04615
DNA repair and recombination proteins [BR:
ster03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOA14_04615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF5710
Motif
Other DBs
NCBI-ProteinID:
AMU93884
UniProt:
A0A142VVS5
LinkDB
All DBs
Position
complement(945821..946702)
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AA seq
293 aa
AA seq
DB search
MTIHNDVASFEAALRLCASCADVRILRRVRPIAELVNDGPPIGRTRRIAIVDTETTSVDV
QTAKVIEIAAAVVLVDEAGEIRAIDTALRGLRDPGIPIPAEVLRLTGISKDDVAGRGLNV
PRWEALLGGSDLIVAHNAAYDAPIVERLLPGIKGHAWACSMREIDWAAHGFDGAKLGHLL
MQMGYFSTGHRADADVISLAHLLTYRPDGARALIAELLARAAQSSLRIEATGAPFDKRHL
LKARGYRWDAREKVWWREIAEAAHEAEALWLSRDAELRATPRVTQLSWHTRYR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccataacgacgtcgcctcgttcgaggcggcgctgcggctctgcgcgtcgtgc
gcggatgtccgcatccttcggcgcgtgcggccgattgccgaacttgtgaacgacggaccg
ccaattggacggacgcggcgcatagcgatcgtcgataccgaaacaacctcggtcgatgtc
cagaccgccaaggtcatcgaaatcgccgccgcggtcgtgctggtcgacgaagccggagaa
atccgcgccatcgatacagcgcttcgcggcctccgcgatcccggtattccgatcccggcc
gaggtgctgcggctgaccggaatatcgaaagacgacgtggcagggaggggcctgaacgtg
ccgcgctgggaagcactgctcggtggctctgacctgattgtcgcgcacaacgcggcctat
gatgctcccattgttgaacgcctgttgcccgggatcaaggggcatgcctgggcctgttcg
atgcgcgaaatcgattgggcggcgcatgggttcgatggcgcaaaactcggtcacctcctc
atgcagatgggttacttcagcaccgggcaccgggcggacgccgatgtgatcagtctcgcg
catctgctgacctatcgtccggacggcgcgcgcgcgctgatcgcggaattgcttgcgcgg
gccgcgcagtcgtcgctgcggatcgaggcgacgggcgcgccgttcgacaaacgccatctt
ctcaaggcgcgcggttatcgctgggatgcgcgtgaaaaggtgtggtggcgcgagattgct
gaagcggcgcatgaggcggaggctctatggctctcgcgcgatgccgagcttcgcgccaca
ccgcgcgtgacccagctcagctggcatacccgttatcgatag
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