Sphingopyxis terrae subsp. terrae: AOA14_04825
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Entry
AOA14_04825 CDS
T04307
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ster
Sphingopyxis terrae subsp. terrae
Pathway
ster03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ster00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOA14_04825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ster03019
]
AOA14_04825
03016 Transfer RNA biogenesis [BR:
ster03016
]
AOA14_04825
Enzymes [BR:
ster01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AOA14_04825
Messenger RNA biogenesis [BR:
ster03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AOA14_04825
Transfer RNA biogenesis [BR:
ster03016
]
Prokaryotic type
tRNA degradation factors
AOA14_04825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
BioW
Motif
Other DBs
NCBI-ProteinID:
AMU93924
UniProt:
A0A142VVX0
LinkDB
All DBs
Position
complement(987899..990205)
Genome browser
AA seq
768 aa
AA seq
DB search
MFDVKKVSIEWGGETLTLETGKVARQADGAVMATLGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKYSAAGRIPGGFFKRERGATEKETLVSRLIDRPIRPLFPEGFYNEINAIAQVLSY
DGHNEPDILAMVAASAALTISGVPFMGPIGAARVGYLDGEYILNPTDEQVAEGDLDLVVA
ATHDAVMMVESEANELSEEIMLGAVMFAHDACREVVKAIIKLAEQAAKEPWEIASSDDNA
AIKDKLKKLIGKDIAAAYKLTDKSARSNALNEARAKAKEQFAADGLSPQEVMAGIKLTKK
LEAEIVRTAILKDGKRIDGRTTTQIRPIVAETHFLPRAHGSALFTRGETQTIATCTLGTK
EAEQMIDGLNGLSYQNFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALHPVLPKKE
DFPYTIRLTSDITESNGSSSMASVCGGSLAMMDAGVPIARPVSGIAMGLILEGQDFAILS
DILGDEDHLGDMDFKVAGTSEGITTMQMDIKIAGITKEIFEKALAQAKEGRAHILGEMNK
ALGEARSELSAHAPRIETITIDKSKIRDVIGTGGKVIREIVATTGAKVDIDDEGTIKIAS
SDTAQIEAAKAWILGIVEEAEVGKIYNGKVVNLVDFGAFVNFMGGKDGLVHVSEIKNERV
EKVADVLSEGQEVKVKVLEIDPRGKVRLSMRVVDQETGEELEDTRPAREPREPRGDRGPR
RDGGDRGDRGRGGRDRGPRRDGGDRGPRRERSEDGPEDQGHVPDFLKD
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgtgaaaaaagtatcgatcgagtggggcggtgaaacgctgactctcgaaacg
ggcaaggttgcccgtcaggccgacggcgccgtgatggcgacactgggcgaaacggtcgtt
ctgtgcgccgtgaccgctgccaagtcggtgaaggaagggcaggacttcttccccctgacc
gtccattatcaggaaaaatattcggccgcggggcgcatccccggcggcttcttcaagcga
gaacgcggtgcgaccgaaaaggaaacgctggtcagccgtctgatcgaccgtccgatccgc
ccgctgttccccgaaggcttctacaacgagatcaatgccatcgctcaggtgctgagctat
gacggccacaatgaacccgacatcctcgcgatggtcgcggcctcggccgcgctcaccatt
tcgggcgtccccttcatgggtccgatcggcgctgcgcgcgtcggctatctcgacggcgaa
tatatcctcaatccgaccgacgaacaggttgccgaaggcgacctcgacctcgtcgtcgcc
gcgacgcacgacgcggtgatgatggtcgaatccgaagcgaacgagctgtcggaagagatc
atgctcggcgccgtgatgttcgcgcacgatgcgtgccgtgaagtcgtcaaggcgatcatc
aagcttgccgaacaggctgccaaggaaccttgggaaatcgcatcgtcggacgacaatgcc
gcgatcaaggacaagcttaagaagctgatcggcaaggacatcgccgccgcctacaagctg
accgacaagtcggcccgttcgaacgcgctcaacgaagcgcgcgcgaaggcgaaggaacag
tttgcagccgacggcctcagcccgcaggaagtcatggccggcatcaagctgaccaagaag
ctggaagccgaaatcgtccgcaccgccatcctgaaggacggcaagcgcatcgacggccgc
acgacgacgcagattcgtccgatcgtcgccgaaacgcacttcctgccgcgcgcgcacggt
tcggcgctgttcacccgcggtgaaacccagacgatcgcgacctgcacgctgggtaccaag
gaagccgaacagatgatcgacggcctcaacggcctgtcgtatcagaacttcatgctgcac
tataacttcccgccctattcggtcggcgaagtcggccgcttcggcgcgccgggccgccgc
gaagtcggccacggcaagctggcgtggcgtgcgctgcaccccgtgctgccgaagaaggaa
gatttcccctacaccatccgtcttaccagcgacatcaccgaatccaacggttcgtcgtcg
atggcgtcggtgtgcggcggcagcctcgcgatgatggatgccggcgtgccgatcgcgcgc
ccggtgtcgggtatcgcgatgggcctgatcctcgaaggccaggatttcgcaatcctgtcg
gacattctgggtgacgaagatcacctcggcgacatggacttcaaggtggcgggcacgtcc
gaaggcatcaccacgatgcagatggacatcaagattgccggcatcaccaaggaaatcttc
gaaaaggcgctggcgcaggccaaggaaggccgtgcgcacatcctcggcgaaatgaacaag
gcgctcggcgaagcccgtagcgaattgtcggcgcatgcgccgcgtatcgaaacgatcacg
atcgacaagtcgaagatccgtgacgtcatcggcaccggcggcaaggtcatccgcgaaatc
gtcgcgacgaccggcgccaaggtggacatcgacgacgaaggcacgatcaagatcgcctcg
tcggataccgcgcagatcgaagccgccaaggcgtggatcctcggcatcgtcgaagaagcc
gaagtcggcaagatctacaacggtaaggtcgtgaacctcgtcgatttcggtgcattcgtg
aacttcatgggcggcaaggacggcctcgtccacgtgtcggaaatcaagaacgaacgcgtc
gaaaaggtcgccgacgttctgtccgaaggccaggaagtcaaggtcaaggtcctcgagatc
gatccgcgcggcaaggtccgcctgtcgatgcgcgtcgtcgatcaggaaaccggcgaggaa
ctggaagacacgcgtccggcgcgcgaaccccgcgaaccgcgcggtgatcgtggtccgcgc
cgtgacggcggcgatcgcggcgaccgtggccgtggcggccgcgatcgcggcccccgccgc
gatggcggcgaccgcggcccgcgtcgcgagcgcagcgaagacggtccggaagatcagggc
catgtgcccgacttcctgaaggactga
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integrated database retrieval system
