Sphingopyxis terrae subsp. terrae: AOA14_10025
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Entry
AOA14_10025 CDS
T04307
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ster
Sphingopyxis terrae subsp. terrae
Brite
KEGG Orthology (KO) [BR:
ster00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ster03016
]
AOA14_10025
Enzymes [BR:
ster01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AOA14_10025
Transfer RNA biogenesis [BR:
ster03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AOA14_10025
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AMU94941
UniProt:
A0A142VYW7
LinkDB
All DBs
Position
complement(2068923..2069540)
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AA seq
205 aa
AA seq
DB search
MTVYFHEEDLPEGAIGPGPVAIDTETMGLNPLRDRLCLVQISDGKGDEHLVRFGPGSRYD
APVLKAILTDPDRLKLFHFARFDIAAMQQALGVVTAPVYCTKIASKLVRTYTDRHGLKEL
VRELLGQDVSKQQQSSDWGAAELSEAQRDYAASDVRFLHAMKEVLDARLAREGRTELAQS
CFDFLPTRAALDLAGWPEVDIFAHS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtatatttccacgaagaagatctgccggaaggcgcgatcggccccggccccgtc
gcgatcgacaccgaaaccatgggactcaacccgctgcgcgaccggctgtgcctcgtccag
atcagcgacggcaagggcgacgagcatctggtgcgattcggccccggcagccgctatgac
gcaccggtcctcaaggcgatcctcactgatcctgaccggctgaaactgttccatttcgcc
cgtttcgatattgccgcgatgcagcaggcgctcggcgttgtcaccgcccccgtctattgc
accaagatcgcgtcgaagctggtgcgcacctacaccgaccgccacgggctcaaggaactg
gtccgcgaactgctgggacaggatgtatcgaagcagcagcagtcgagcgactggggcgct
gccgaactgagcgaggcgcagcgcgactatgccgcgagcgatgtccgctttctgcacgca
atgaaggaggtgctcgacgcccgcctcgcgcgcgaggggcgcaccgaactcgcacaatcc
tgcttcgatttcctcccgacgcgcgccgcgctcgacctcgccggatggcccgaggtcgac
atcttcgcgcatagctga
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