Sphingopyxis terrae subsp. terrae: AOA14_13430
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Entry
AOA14_13430 CDS
T04307
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ster
Sphingopyxis terrae subsp. terrae
Pathway
ster03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ster00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AOA14_13430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ster03021
]
AOA14_13430
03400 DNA repair and recombination proteins [BR:
ster03400
]
AOA14_13430
Enzymes [BR:
ster01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AOA14_13430
Transcription machinery [BR:
ster03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AOA14_13430
DNA repair and recombination proteins [BR:
ster03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AOA14_13430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF8013
Motif
Other DBs
NCBI-ProteinID:
AMU95610
UniProt:
A0A142W0L7
LinkDB
All DBs
Position
2810976..2811320
Genome browser
AA seq
114 aa
AA seq
DB search
MARVTVEDCVDKVPNRFDLVLLSAHRAREISGGSELTIDRDRDKNPVVALREIAEQTIRP
VDLKDALTGSLQKVVVDDDDTPDEISSIARSAEALRLTAAAPPRSPAGGGADFD
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgttaccgtcgaagattgcgtcgacaaagttcccaaccgtttcgatctggtg
ctgctttcggcgcatcgcgcccgcgaaatttcgggcggctcggagctgaccatcgatcgc
gatcgcgacaagaatccggtcgtcgcgctgcgcgagatcgccgaacagacgattcgcccc
gtcgacctcaaggacgcgctcaccggatcgctgcagaaggttgtcgtcgacgatgacgat
acgcccgatgaaatcagctcgatcgcgcgctcggccgaggcgcttcgcctcaccgccgct
gcgccgccgcgcagccctgcgggcggcggtgccgatttcgactga
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