Sphingopyxis terrae subsp. terrae: AOA14_15915
Help
Entry
AOA14_15915 CDS
T04307
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ster
Sphingopyxis terrae subsp. terrae
Brite
KEGG Orthology (KO) [BR:
ster00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ster03032
]
AOA14_15915
03036 Chromosome and associated proteins [BR:
ster03036
]
AOA14_15915
03400 DNA repair and recombination proteins [BR:
ster03400
]
AOA14_15915
DNA replication proteins [BR:
ster03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AOA14_15915
Chromosome and associated proteins [BR:
ster03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AOA14_15915
DNA repair and recombination proteins [BR:
ster03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AOA14_15915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AMU96093
UniProt:
A0A142W248
LinkDB
All DBs
Position
3338810..3339088
Genome browser
AA seq
92 aa
AA seq
DB search
MIRSELVQMIASENSDLRLEEVERIIDEFFDAIVEQLAAGGRVELRGFGAFSTRERESRT
GRNPRTGAPVAVSAKSVPYFKPGKEMRERLNG
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtcggaactggttcaaatgatcgcgagtgaaaacagcgatttgcgcctcgaa
gaggtggaacgcatcatcgatgaattcttcgacgccatcgtcgagcagcttgcggcgggg
ggccgcgtcgagctgcgcggcttcggcgccttctcaacccgcgaacgcgagtcgcgcacc
gggcgcaatccgcgcaccggcgcgccggtcgcggtaagcgccaagagcgtgccctatttc
aagccgggcaaggaaatgcgcgagcggctgaacggctga
DBGET
integrated database retrieval system
