Sphingopyxis terrae: AOA14_16600
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Entry
AOA14_16600 CDS
T04307
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ster
Sphingopyxis terrae
Brite
KEGG Orthology (KO) [BR:
ster00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ster03019
]
AOA14_16600
03009 Ribosome biogenesis [BR:
ster03009
]
AOA14_16600
03036 Chromosome and associated proteins [BR:
ster03036
]
AOA14_16600
Enzymes [BR:
ster01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
AOA14_16600
Messenger RNA biogenesis [BR:
ster03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AOA14_16600
Ribosome biogenesis [BR:
ster03009
]
Eukaryotic type
90S particles
RNase
AOA14_16600
Prokaryotic type
rRNA processing factors
AOA14_16600
Chromosome and associated proteins [BR:
ster03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
AOA14_16600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AMU96222
UniProt:
A0A142W2N6
LinkDB
All DBs
Position
3492731..3493414
Genome browser
AA seq
227 aa
AA seq
DB search
MNEGVSAETLAAITGATPRDLGLYREALTHGSSGAGDYQRLEFLGDRVLGLVIASELFAR
FPKAAEGELSSRLHALASGETCARIAQALDLTAHVRFGAQAIGDGGRHSDNIAADVLEAL
IGALWLDLGQDAARAFIVRNWGSMIEGQVAAPKHPKAALQEWALARKRKPPEYRLVRRDG
PDHAPRFRVAVAIGKLAEAEGDGPSKQAAEKAAATALLEILTQEDVK
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgaaggcgtatccgcggaaacgcttgccgccattaccggcgcaacgccccgcgac
cttggcctctaccgcgaggcgctgacccacggcagcagcggtgcgggtgattatcagcgg
ctggaatttctgggcgaccgcgtgctcggcctcgtcattgcttccgaattgttcgcccgc
tttccgaaggcggcggagggcgaattgtcatcgcggctgcacgcgcttgcgtcgggcgaa
acctgcgcgcggatcgcgcaggcgctcgaccttaccgcgcatgtccgcttcggcgcgcag
gcgatcggcgatggcgggcggcatagcgacaatatcgccgccgacgtgctcgaagcgctg
atcggcgcgctgtggctcgaccttggccaggacgccgcgcgggcattcatcgtccgcaat
tggggcagcatgatcgaaggccaggtcgccgcgcccaaacatcccaaggcggcgcttcag
gaatgggcgctcgcgcgcaagcgcaagccccccgaatatcgcctcgtccgccgcgacggc
cccgaccacgccccgcgcttccgcgtcgccgtcgcgatcggcaagctcgccgaggccgaa
ggcgacggcccgtccaagcaggctgccgagaaggcggccgccaccgccctgctcgaaatc
ttgacccaggaagacgtgaaatga
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