Sphingopyxis terrae subsp. terrae: AOA14_16615
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Entry
AOA14_16615 CDS
T04307
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ster
Sphingopyxis terrae subsp. terrae
Brite
KEGG Orthology (KO) [BR:
ster00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ster03032
]
AOA14_16615
03400 DNA repair and recombination proteins [BR:
ster03400
]
AOA14_16615
Enzymes [BR:
ster01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AOA14_16615
DNA replication proteins [BR:
ster03032
]
Prokaryotic type
DNA Topoisomerases
AOA14_16615
DNA repair and recombination proteins [BR:
ster03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AOA14_16615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AMU96225
UniProt:
A0A142W3X7
LinkDB
All DBs
Position
complement(3494688..3497246)
Genome browser
AA seq
852 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGRDFKVLASYGHVRDLPPKDGSVDPDDGFSMEWQLYPDKAK
RLKDIQDAAKQADRLILATDPDREGEAISWHVQELLRQKKALPQKVDRVTFNAITKQAVT
DAMAHPRGLDDDLIDAYRARRALDYLVGFTLSPVLWRKLPGAKSAGRVQSVALRLVVERE
REIEAFVAQQYWSITGQFEMGGTPFKARLARWRGDKIERLTITNEADARAAEADVKAGHF
TVDSVETKPLTRNPPPPFTTSTLQQEAARKLGFSASHTMRVAQDLYEDGAITYMRTDGVQ
MDGSAISAARRAIADRYDGGYVPDQPRQYQTKAKNAQEAHEAIRPTDFGKDKVGGGDHAR
LYDLIWKRALASQMASARLERTSIDLSDGTGKTMLRATGQVVKFPGFLALYDESRDDSAD
DEDARLLPAMAKGDAPAKTGVEVEAHETQPPPRYSEASLVKKMEELGIGRPSTYASILQV
LKDRAYVRVEKNRFLPEESGRLLTAFLERFFGRYVEYDFTAGLEEELDDVSGGRAQWQAV
LERFWRDFKPRTGEVMEQKPSEITAALDEFLGPYLFPDKGDGSDPRVCPNCGTGRLALRG
GRFGPFIACSNYPECKFTRKFAQPGGSDGADSGPETLGTDPESGLEVTKRSGRFGPYIQL
GDGKEAKRSSIPKDIPAEDFDLDYALRLLSLPRDVGTHPESGKPIVAGLGRYGPYLLHDG
KYAKLTGTAEIFDIGMNAAVARIADAANGGGRGTRAKAEPLKTFGPHPTSGGEMKLMAGR
FGPYVTDGTTNATLPKTVEPDALTVEEAVALIDARAAKGPAKGKKKTPAKKAAAKKPAAK
KAPAKKKAAKDA
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcaattggtgattgtggaatcgcccgccaaggcgaagacgatcgagaaatatctcggc
cgtgatttcaaggtgctggccagctatggccacgtccgcgacctgccgcccaaggacggc
tctgtcgatccggatgacggtttttcgatggagtggcagctctatccggacaaggcgaag
cggctgaaggatattcaggatgccgcgaagcaggccgaccgtctgattctcgcgaccgac
cccgatcgcgagggcgaggcgatcagctggcacgtgcaggaattgctgcgccagaaaaag
gcgctgccgcaaaaggttgaccgcgtgaccttcaacgcgatcaccaagcaggcggtgacc
gatgcgatggcgcatccgcgcggtctcgacgacgatctgatcgacgcgtaccgcgcgcgc
cgcgcgctcgattatctcgtcggtttcaccctctcgccggtgctgtggcgcaagctgccc
ggcgccaaatcggcgggccgcgtccagtcggtggcgctgcgcctcgtcgtcgaacgcgaa
cgcgaaatcgaagcctttgttgcgcagcaatattggtcgatcaccggccagttcgaaatg
ggcggcacgccgttcaaggcgcggctggcgcgctggcgcggcgacaagatcgagcgcttg
acgatcaccaacgaggccgatgcgcgcgccgccgaagccgatgtgaaggcgggtcatttc
accgtcgacagcgtcgaaaccaagccgctgacgcgcaatccgccgccgcccttcacgacc
tcgaccctgcaacaggaagccgcgcgcaagctcggtttctcggccagccacacgatgcgg
gttgcgcaggatctctacgaggacggcgcgatcacctacatgcgtaccgacggcgttcag
atggacggcagcgcgataagcgccgcgcggcgggcgattgctgaccgctacgacgggggc
tatgttcccgatcagccgcgccagtatcagaccaaggcgaagaacgcgcaggaagcgcac
gaggcgatccgtccgaccgattttggcaaggacaaggtcggcggcggcgatcatgcgcgc
ctctacgatctgatctggaagcgtgcgctggcgagccagatggcctcggcgcggctcgaa
cgcacgagcatcgatctgagcgacggcaccggcaagacaatgctccgcgcgacaggtcag
gttgtgaaattccccggcttcctggcgctctatgacgaaagccgcgacgacagcgccgac
gatgaggatgcgcgcttgcttcccgcgatggcaaagggcgatgcacccgccaagaccggc
gtcgaggtcgaagcccacgagacgcagccgccgccgcgctattcggaagcgagcctggtc
aagaagatggaggaactcggcatcgggcgcccgtcgacctatgcctcgatccttcaggtg
ctcaaggaccgcgcctatgtgcgcgtcgaaaagaaccgcttcctgccggaagagagcggg
cgattgctcaccgctttcctcgaacgcttcttcggccgctatgtcgaatatgatttcacc
gcgggcctcgaagaagagctcgacgacgtgtcgggcggccgcgcccagtggcaggcggta
ctcgaacgcttctggcgcgacttcaagccgcgcaccggcgaggtgatggagcagaagccg
tcggaaattaccgcggcgctcgacgagtttctcggcccctatctcttccccgacaagggc
gacggcagcgatccgcgcgtctgcccgaattgtggcaccgggcggctcgcgctgcgcggc
gggcgcttcggtccgttcatcgcgtgcagtaactatcctgagtgcaaattcacgcgaaaa
ttcgcgcagccgggcggcagcgacggcgccgacagcggccccgaaacgctgggtaccgat
cccgaaagcgggctcgaggtgacgaagcgcagcggccggttcggaccttatatccagctc
ggcgatggcaaggaggcgaagcgctcgtcgatcccgaaggacattccggccgaggatttc
gatctggactatgcgctgcggctcctgagcctgccgcgcgacgtcgggacgcatcccgaa
agtggcaagccgatcgtcgcgggactggggcgctatggtccctatctgctccatgacggc
aaatatgcgaagctgaccggcaccgccgaaatcttcgacatcggcatgaacgcggcggtg
gcgcgtatcgccgatgcggcgaatggcggcggccgcggcacgcgcgccaaggccgagcca
ttgaagactttcggcccgcacccgacgagcggcggcgaaatgaagctgatggccggacgt
ttcgggccttatgtgaccgacggcacgaccaacgccacgctgcccaagacggtcgagccc
gacgcgctgactgtcgaggaagctgtcgccctgatcgacgcccgcgccgcgaaaggaccg
gcgaagggcaagaagaagacgcccgcgaagaaggctgcggccaaaaagccggccgcaaag
aaggcgccggcaaagaagaaggccgcgaaggacgcgtga
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