Sphingopyxis terrae subsp. terrae: AOA14_16810
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Entry
AOA14_16810 CDS
T04307
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ster
Sphingopyxis terrae subsp. terrae
Pathway
ster03030
DNA replication
ster03430
Mismatch repair
ster03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ster00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOA14_16810
03430 Mismatch repair
AOA14_16810
03440 Homologous recombination
AOA14_16810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ster03032
]
AOA14_16810
03400 DNA repair and recombination proteins [BR:
ster03400
]
AOA14_16810
Enzymes [BR:
ster01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOA14_16810
DNA replication proteins [BR:
ster03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOA14_16810
DNA repair and recombination proteins [BR:
ster03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOA14_16810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
tRNA_anti-codon
COE1_HLH
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AMU96264
UniProt:
A0A142W2K8
LinkDB
All DBs
Position
complement(3535668..3539156)
Genome browser
AA seq
1162 aa
AA seq
DB search
MAYSPFVPLRVFSSFTMLEGAIEPKAIAKAARERGFPAIAVADRNGLYGVMAFGDACKAA
GVQPIVGALLSVARPGQRLASGAPLIDWIALYAQDDAGYNNLCALVSAAHLGRPVEQEPH
VLLSDLAGKTDGLICLTGGGEGALARLLAGEQKTAADEYVEQLEALFADRLYIELSRRGD
ATEKAAEEALIELAYTRALPLVATNPANFVDPQFHPAHDAMLCIAQSAYVESEDRRSSNP
EAWLKSAEAMEDSFSDLPEAIRNTLVIAQRCAFMAPKRKPILPSLAGDREGEAAQLKVDA
HAGLAERLALYPDLTEEEKQAYVARLDFEVDVITQMGFPGYFLIVADFIKWAKAHDIPVG
PGRGSGAGSLVAWSLTITDLDPLKLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQ
EKYGRDTVAQIITFGKLKARAVLKDTGRVLQMSYGQVDRLAKLVPNHPTDPWTLERALNG
VSELMTEYKQDDGVRRLFDMARQLEGLPRHSSTHAAGVVIGDRPLDQLVPLYRDPRSYMP
VTQFDMKYVETAGLVKFDFLGLKTLSVLKEARRLLALRGIDVDLDTLGWDDPAVYELLQR
GDTVGVFQLESEGMRRTLSAVKPTNFGDIIALVALYRPGPMDNIPLFGARKNGREPIAYP
HPLLEGILAETYGIFVYQEQVMQAAQILAGYSLGGADLLRRAMGKKVQAEMDAQRDTFVK
GCGEHNGIDAKAANELFDLIDKFAGYGFNKSHAAAYALLSYQTAWLKAHYPHEFFAASMS
FDSHQTDKLSIFIDDMRRLDIAIAPPSINDSEADFSVGRSEDGLAVRYALGALKGVGEKA
MEALVAERQAKGDFASLDDFAARIDPKLLNRRQIEALAGGGAFDCVEPDRPRAFAGAEAL
LACANSSAHERSTGQGGLFGGDVAIAPVLQLSAAEPWTLAERMAKEKDAFGFYFSAHPVE
QYEAVIAARGARTYGNICETVEMTPGTRIPMVMAAMVESARPRVSQRGNRFLNLTLSDRS
GQFQSSCFDEQTGKILEALAVDGGCALLNVELDLLEGEETPRVTVRGAQSLADIAASAAL
QLDCRVELAEAPGEMLRYLERREDARGRVIVSTTDPLTGEDIRIELGRGFALGPDTVSRL
QMVAGVTDVALSLVPPRDFRVR
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggcctacagcccctttgttcccctgcgcgtcttttccagtttcaccatgctggagggg
gcgatcgagcccaaggcgatcgcgaaagcggcgcgcgagcggggctttccggcgatagcg
gtcgcggatcgcaacgggctgtacggtgtcatggcctttggcgacgcgtgcaaggcggcg
ggtgtccagccgatcgtcggtgcgctgctgagcgtggcgcggccggggcagcggctggcg
agcggcgcaccgctgatcgactggattgcgctctatgcgcaggacgatgcgggctacaat
aatctttgcgcgctggtgtctgcggcgcacctcggccgaccggtcgagcaggagccgcat
gtcctgctttcggacctcgccggcaagaccgacgggctcatctgcctgaccgggggcggc
gagggcgctctggcgcgcttgctggccggcgagcagaagacggccgccgacgagtatgtc
gagcagctggaagcgcttttcgccgatcggctgtatatcgaactgtcgcggcggggcgat
gcgactgaaaaggccgccgaggaggcgctgatcgagctggcctacacgcgcgcgttgccg
ctggttgcgaccaatcccgccaatttcgtcgatccgcaatttcatcccgcgcatgatgcg
atgctgtgcattgcgcagtcggcctatgtcgaaagcgaggatcgccgctcgtccaacccc
gaagcctggctgaaatcggccgaggcgatggaggacagtttctccgacctgcccgaggcg
atccgcaacacgctggtgatcgcgcagcgctgcgccttcatggcgcccaagcgcaaaccg
atcctgccgagccttgccggcgaccgcgagggcgaggcggcgcagctcaaggtcgatgcc
cacgcagggctggccgaacggcttgcgctctatccggaccttaccgaggaagaaaagcag
gcctatgtcgcgcggcttgacttcgaggtcgacgtcatcacgcagatgggctttccgggc
tacttcctgatcgttgccgacttcatcaaatgggcgaaggcgcacgatattccggtgggg
ccggggcgtggatcgggtgcgggcagcctcgtcgcctggtcgctgaccatcaccgacctc
gacccgcttaagctcgggctgctgttcgaacgcttcctcaatcccgagcgcgtgtcgatg
cccgacttcgacatcgacttctgcgaaacccgccgcggcgaggtgatccgctatgtgcag
gagaaatacggccgcgacaccgtcgcgcagatcatcaccttcggtaagctgaaggcgcgc
gcggttctgaaggacaccggccgcgtgctccagatgagctatgggcaggtcgaccggctc
gcgaagctggtaccgaaccatccgaccgatccctggacgctcgaacgcgcattgaacggc
gtcagcgagctgatgaccgaatataagcaggatgacggcgtccgccgcctgttcgacatg
gcgcgccagctcgaaggcctgccgcggcacagttcgacccacgcggcgggggtcgtgatc
ggggaccggccgctcgaccagcttgtcccgctctatcgcgatccgcgctcgtatatgccg
gtcacgcagttcgacatgaaatatgtcgagacggcggggctggtgaagttcgactttctt
ggcctcaagacgctgtcggtgctcaaggaagcgcggcgcctgctcgcgctgcgcgggatc
gatgtcgatctcgatacgctcggctgggacgatcccgcggtctatgagttgctccagcgc
ggcgacaccgtcggggtgttccagctggaatccgaagggatgcggcgcacgctgtcggcg
gtgaagccgaccaatttcggggacattatcgcgctcgtcgcgctgtatcggccagggccg
atggacaatattccgctattcggcgcgcgcaagaacgggcgcgagccgatcgcctatccg
cacccgctgctcgaaggcatcctcgccgaaacctacggcatcttcgtctatcaggaacag
gtgatgcaggcggcgcagatcctggccggctacagcctcggcggcgcggacctgttgcgc
cgcgcgatgggcaagaaggtgcaggcggagatggacgcgcagcgcgacaccttcgtcaaa
ggttgcggcgagcataatggcatcgacgccaaggccgcgaacgagctgttcgacttgatc
gacaaattcgcgggctatggcttcaacaagagccatgcggcggcctatgcgctgctctcc
tatcagacggcgtggctgaaggcgcattatccgcacgaattcttcgccgcgtcgatgtcg
ttcgacagccatcagaccgacaaattgtcgatcttcatcgacgatatgcgccgcctcgac
atcgcgatcgcgccgccgtcgatcaacgacagcgaggccgatttttcggtcgggcgcagc
gaagacgggctcgcggtccgctacgcgctcggcgcgctcaaaggtgtcggcgaaaaggcg
atggaggctctcgtcgccgagcgtcaagccaagggcgattttgcgagtctcgacgatttt
gccgcgcgcatcgaccccaagctgctcaaccgccgccagatcgaggcgctggcggggggc
ggcgcgttcgactgcgtcgaacccgaccgaccgcgcgcctttgctggagccgaggcgttg
ctggcctgcgccaatagttcggcgcacgaacgctcgacggggcagggcgggttgttcggc
ggtgatgtcgcgatcgcgccggtgctccagctgtccgctgccgaaccctggacgcttgcc
gagcggatggcgaaggaaaaggacgcgttcggcttttatttctcggctcacccggtcgaa
caatatgaggcggtgatcgcggcgcgcggtgcgcggacctacggcaatatctgcgaaacg
gtcgaaatgacgcccggaacccgcatcccgatggtgatggcggcgatggtcgaaagcgcg
cgcccgcgcgtgtcgcagcgcggcaatcgcttcctcaacctgacgctgtcggaccgcagc
ggacaatttcagtcgagctgcttcgacgagcagacgggcaagatattggaggccttggcg
gtcgacggcggctgcgcgctgctcaacgtcgaactcgatctgctcgagggcgaggaaacg
ccgcgcgtgacggtgcgcggggcgcagtcgctcgccgacattgcggcgagtgccgcgctg
caactcgattgccgcgtcgaactcgccgaggcgccgggcgagatgctccgctatctcgaa
cggcgcgaggatgcgcgcgggcgggtgatcgtatcgacgaccgatccgctgacgggcgag
gacatccggatcgagctgggacgcggcttcgcgctcggcccagacaccgtctcgcggctc
caaatggttgcaggtgtaaccgatgtggcgctttcgctggtcccgccgcgcgattttcgc
gtccgctag
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