Stenotrophomonas sp. ASS1: MG068_00020
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Entry
MG068_00020 CDS
T06051
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
stes
Stenotrophomonas sp. ASS1
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stes03032
]
MG068_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
stes03400
]
MG068_00020 (gyrB)
Enzymes [BR:
stes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MG068_00020 (gyrB)
DNA replication proteins [BR:
stes03032
]
Prokaryotic type
DNA Topoisomerases
MG068_00020 (gyrB)
DNA repair and recombination proteins [BR:
stes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MG068_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QBL38980
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Position
4908..7367
Genome browser
AA seq
819 aa
AA seq
DB search
MSDEQNTPANNGNYDANSITALEGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSIDEA
LAGHADHVAVTIHADGSVSVSDNGRGIPTGKHEQMSAKLGREVSAAEVVMTVLHAGGKFD
DNSYKVSGGLHGVGVSVVNALSQKLLVDVFQNGSHYQQEFSNGAAVTALAKLEATTKRGT
TVRFWPSTVAFHDNVEFHYDILARRLRELSFLNSGVKIVLADERGDGRRDDFHYEGGIRS
FVEHLAQLKTPLHPNVISVTGEHNGIVVDVALQWTDSYQETMYCFTNNIPQKDGGTHLAG
FRGALTRVLNNYIEQNGIAKQAKINLTGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSD
VRPAVENAFGARLEEFLQENPNEAKAIAGKIVDAARAREAARKARDLTRRKGALDIAGLP
GKLADCQEKDPALSELFIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLSS
DQVGTLITALGTGIGRDEYNPDKLRYHKIIIMTDADVDGAHIRTLLLTFFYRQMPELIER
GYVYIGLPPLYKIKQGKQELYLKDDPALDSYLASSAVENAALVPATGEPGIEGLALEKLL
LAYAAALDSIERNAHRYDRNLLEALVDFVPMDLESLRAAGEGEGLDALAKRLNQGSLGSP
RFTLELQDANDERPAAVLVTRRHMGEQHIQVLPMSAFESGELRAIHQASKLLHGLVREGA
TISRGAKSIEVDSFAKAQNWLLEEAKRGRQIQRFKGLGEMNPEQLWDTTVNPETRRLLQV
RIEDAVAADQIFSTLMGDVVEPRRDFIEDNALKVANLDI
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaacagaacaccccggcaaacaacggcaattacgacgccaacagcattacc
gccctggaaggcctggaggctgtccgcaagcgtcccggcatgtacatcggcgacgtgcat
gacggcaccggtctgcaccacatggtgttcgaggtcgtcgacaactcgatcgacgaagcg
ttggccggccacgccgaccacgttgcagtgacgatccacgccgacggctcggtctcggtg
tccgacaacggccgtggtattccgaccggcaagcacgagcagatgagcgccaagctcggt
cgcgaagtgtctgcggccgaagtggtcatgaccgtcctgcacgcaggcggcaagttcgac
gacaacagctacaaggtttcgggcggcctgcacggcgtcggcgtcagcgtggtcaacgcg
ctgtcgcagaagctgctggtggacgtgttccagaatggctcccactaccagcaggaattc
agcaacggcgcagccgtgactgcgctggccaagctggaagccaccaccaagcgcggtacc
accgtgcgcttctggccgtcgaccgtcgccttccacgacaacgtggaattccactacgac
atcctggcccgccgcctgcgcgagctgtcgttcctgaactccggcgtcaagatcgtcctt
gccgacgagcgtggcgatggccgtcgcgatgacttccactacgaaggcggcatccgcagc
ttcgtggagcatctggcccagctgaagaccccgctgcacccgaacgtcatttcagtcacc
ggcgagcacaacggcatcgtcgtggacgtggcgctgcagtggaccgactcctaccaggag
acgatgtactgcttcaccaacaacattccgcagaaggacggcggtacccacctggccggt
ttccgcggtgcgctgacccgtgtgctcaacaactacatcgagcagaacggcatcgccaag
caggccaagatcaacctgaccggcgatgacatgcgcgaaggcatgatcgcagtgctgtcg
gtgaaggtgccggacccgagcttctccagccagaccaaggaaaagctggtcagctccgac
gtgcgcccggcggtggaaaatgccttcggtgcgcgcctggaagagttcctgcaggaaaac
ccgaacgaagccaaggcgatcgccggcaagatcgtcgatgccgcacgtgcacgtgaagcc
gcgcgcaaggcccgcgacctgacccgccgcaagggcgcgctggacatcgcgggcctgccg
ggcaagctggccgactgccaggaaaaggatccggcgctgtccgaactgttcatcgtcgag
ggtgactcggcaggtggttcggccaagcagggccgcaaccgcaagaaccaggcggtgctg
ccgctgcgcggcaagatcctcaacgtggaacgcgcgcgtttcgatcgcatgctgtcctcc
gaccaggtgggtacgctgatcaccgcgctgggcaccggcatcggccgtgacgagtacaac
ccggacaagctgcgttaccacaagatcatcatcatgaccgacgccgacgtcgacggcgcc
cacatccgcaccctgctgctgacgttcttctaccgtcagatgccggagctgatcgagcgc
ggttacgtctacatcggcctgccgccgctgtacaagatcaagcagggcaagcaggagctg
tacctgaaggacgacccggcgctggacagctacctggccagcagcgcagtggaaaacgct
gcactggtgccggccaccggcgagcccggcatcgaaggcctggcgctggagaagctgctg
ctggcctacgcggcggcgctggattcgatcgagcgcaacgcacaccgctacgaccgcaac
ctgcttgaagcgctggtcgacttcgtcccgatggacctggaaagcctgcgcgctgccggc
gaaggcgagggcctggatgcactggccaagcgtctcaaccagggcagcctgggcagcccg
cgtttcacgctggaactgcaggacgccaacgatgagcgcccggccgctgtgctggtgacc
cgtcgccacatgggcgaacagcacatccaggtgctgccgatgtcggccttcgaaagcgga
gaactgcgcgcgatccaccaggcatcgaagctgctgcacggtctggtccgcgaaggcgcg
accatttcccgcggtgccaagtcgatcgaagtcgacagctttgccaaggcacagaactgg
ctgctcgaggaggccaagcgcggccgccagatccagcgattcaagggtctgggtgaaatg
aatccggagcagttgtgggacactacggtgaatccggaaacccgtcgactgctgcaggtg
cgcatcgaagatgctgtcgctgccgaccagattttcagcacgctgatgggcgatgtcgtc
gaaccgcgtcgcgacttcatcgaagacaacgcgctgaaggtcgcaaacctggatatctga
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