Stenotrophomonas sp. ASS1: MG068_00310
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Entry
MG068_00310 CDS
T06051
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
stes
Stenotrophomonas sp. ASS1
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stes03032
]
MG068_00310
03400 DNA repair and recombination proteins [BR:
stes03400
]
MG068_00310
Enzymes [BR:
stes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MG068_00310
DNA replication proteins [BR:
stes03032
]
Prokaryotic type
DNA Topoisomerases
MG068_00310
DNA repair and recombination proteins [BR:
stes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MG068_00310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QBL39037
LinkDB
All DBs
Position
73669..74724
Genome browser
AA seq
351 aa
AA seq
DB search
MPTPSTPERQAARAAGLRYVDDTQPGISRRRAGKGFSYRDADGHAIRDATTLQRIRALAI
PPAYTAVWICAHANGHLQATGRDARGRKQYRYHADWAKERDAGKFDRIIAFGEALPTLRR
RLSRDLKRPGFPQEKVLAMVVALLADTLVRVGNETYAQQNRSFGLTTLRNRHLELLRGGR
VRMRFRGKSGQLQEVTVGDRKLGLLVRRLQQLPGQALFQYRDDDGALQPVDSGAVNDYLR
EVMGEDFTAKDFRTWGGTVAAVQAFAATELPEPASQRALAQAQRAVVCEVASLLGNTPAV
CRKAYIDPCVFAGWERGELAKLAGLRGPRQWEQATLRVLRRARRLSRSRSR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccccctctactcccgaacgacaggccgcacgcgcggccggcctgcgctatgtc
gacgatacccagccgggcatcagccggcgccgcgccggcaagggtttcagctaccgcgat
gccgatggtcacgcgatacgcgacgccaccaccctgcaacgcatccgtgcgctggcgatt
ccgccggcgtataccgccgtatggatctgcgcccacgccaacggccacctgcaggccacc
ggccgcgatgcacgcggacgcaagcagtaccgctaccacgccgactgggccaaggagcgc
gacgccggcaagttcgaccgcatcatcgcctttggcgaggccttgcccacgctgcggcgg
cggttgtcgcgggatctcaagcgacctgggtttccgcaggaaaaggtgctggccatggtg
gtggcgctgttggcggacaccctggtgcgggtcggcaatgaaacctatgcacaacagaac
cgttcgttcggactgaccacgctgcgcaaccgccatctggagctgctgcgcggcggccgg
gtgcgcatgcgcttccgcggcaagtccgggcagctgcaggaggtgaccgtgggcgaccgc
aagctgggactgctggtgcggcgcctgcagcagctgccggggcaggcgctgttccagtac
cgcgatgacgacggtgcgctgcagccggtggattccggcgcggtgaacgactacctgcgc
gaggtgatgggcgaggacttcactgccaaggatttccgcacctggggtggcacggtggcg
gcggtgcaggcgtttgccgccaccgaactgccggaaccggccagtcagcgcgcgctggcg
caggcgcagcgcgcggtggtgtgcgaagtggcatcgctgctgggcaacacgccggcggtg
tgccgcaaggcctacatcgacccgtgcgtgttcgccggctgggagcgcggtgaactggcc
aagctggccggcctgcgtgggccgcgccagtgggagcaggccaccctgcgcgtgctgcgc
agggcgcgcaggctcagccgcagtagatcgcggtga
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