Stenotrophomonas sp. ASS1: MG068_02570
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Entry
MG068_02570 CDS
T06051
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
stes
Stenotrophomonas sp. ASS1
Pathway
stes00521
Streptomycin biosynthesis
stes00523
Polyketide sugar unit biosynthesis
stes00525
Acarbose and validamycin biosynthesis
stes00541
Biosynthesis of various nucleotide sugars
stes01100
Metabolic pathways
stes01110
Biosynthesis of secondary metabolites
stes01250
Biosynthesis of nucleotide sugars
Module
stes_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MG068_02570 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MG068_02570 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
MG068_02570 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MG068_02570 (rfbB)
00525 Acarbose and validamycin biosynthesis
MG068_02570 (rfbB)
Enzymes [BR:
stes01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
MG068_02570 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
adh_short
NAD_binding_4
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QBL39462
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Position
558270..559325
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AA seq
351 aa
AA seq
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MPTWLVTGGAGFIGSNFVLEAVARGIKVVNLDALTYAGNLKTLSSLDGNPTHVFVQGDIG
DSALVARLLAEHQPGAVLNFAAESHVDRSIDGPGAFIQTNVVGTLGLLEAVRDYWKALPA
EQGAAFRFLHVSTDEVYGTLGETGKFSETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAK
GQVGETYNVGGNSEKQNIEVVQAICALLDARRPREDGLPRSSQITYVTDRPGHDRRYAID
ASKLKNDLGWEPAYTFEQGIAFTVDWYLDNQDWVNGVLDGSYRLQRIGTTA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtgcccacatggcttgtcaccggcggcgccggattcattggcagtaactttgttctcgaa
gccgtcgcccgtggcatcaaggtcgtcaatctcgacgctctgacctacgccggtaacctg
aagaccctgtccagcctggacggcaatcccacccatgtgttcgtgcagggcgacattggc
gacagcgccctggtggcccgcctgctggccgaacaccagcccggcgcggtgctgaacttc
gccgccgaaagccacgtggaccgttccatcgacggcccgggcgcgttcatccagaccaac
gtggtcggcaccctgggcctgctggaggcggtgcgcgactactggaaggcgctgccggcc
gagcagggcgcggccttccgtttcctgcacgtgtccaccgacgaggtgtacggcacgctg
ggtgagaccggcaaattcagcgaaaccactccgtacgccccgaattcaccgtactcggcg
tcgaaggcggcttcggaccatctggtgcgtgcgttccaccacacctacgggttgccggtg
ctgaccaccaactgctccaacaactacggcccgtaccacttccccgagaagctgatcccg
ctggtgatcgccaaggcgctggccggcgagccgctgccggtgtacggcgacggcaagcag
gtgcgtgactggctgttcgtgtccgaccactgcgaggcgatccgtaccgtgctggccaag
ggccaggtcggcgagacctacaacgtcggcgggaactcggaaaagcagaacatcgaagtg
gtgcaggccatctgcgcgctgctcgatgcgcgccgcccgcgtgaggatggcctgccgcgc
agcagccagatcacctacgtcaccgaccgcccgggccatgaccgccgttacgcgatcgat
gcatcgaagctgaagaacgacctgggctgggaaccggcctacaccttcgagcagggcatc
gccttcaccgtcgactggtacctggacaaccaggactgggtcaacggtgtgctcgacggc
agctaccgtctgcagcgcatcggcaccacggcttga
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