Stenotrophomonas sp. ASS1: MG068_06835
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Entry
MG068_06835 CDS
T06051
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
stes
Stenotrophomonas sp. ASS1
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stes03016
]
MG068_06835
Enzymes [BR:
stes01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
MG068_06835
Transfer RNA biogenesis [BR:
stes03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
MG068_06835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
QBL40249
LinkDB
All DBs
Position
complement(1486668..1488086)
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AA seq
472 aa
AA seq
DB search
MTGTPDVFPPATPGGTPLVALPAGPRKPDQVKGKLYIKTHGCQMNEYDSAKMADVLAASD
GLELTDSPDDADVILVNTCSIREKAQEKVFSQLGVWKGLKNKGREVIIGVGGCVASQEGE
AIIKRAPFVDLVFGPQTLHRLPELIRARREQKRPQVDISFPEIEKFDRLPEPRAEGASAF
VSIMEGCSKYCSFCVVPYTRGTEVSRPFEDVVVEVAQLAAQGVREINLLGQNVNAYRGPY
GDGEFADLGLLIRTIAEIDGVGRIRFTTSHPLEFSDSLIDAFRDVPQLANFLHLPVQAGS
DRVLSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETDADFEKTMKLIEDIGF
DHSFSFIYSRRPGTPAADLEDTISDAEKHARLSRLQERINAHAAGISEKMVGTVQTVLVE
GPSRKNPNELTGKTENMRSVNFPAPARLIGQFVDVVITEALTNSLRARVVAE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggacgccagacgtctttccgcccgccacgccgggcggtaccccgctcgttgcc
ctgcccgccggtccgcgcaagcccgaccaggtgaaaggcaagctgtacatcaagacccac
ggttgccagatgaacgagtacgactcggccaagatggccgacgtgcttgccgccagcgat
gggctggaactgaccgacagcccggacgacgccgacgtcatcctggtcaatacctgctcc
atccgcgagaaagcgcaggagaaggtattcagccagctgggcgtatggaagggcctgaag
aacaagggccgcgaggtcatcatcggcgtcggcggctgcgtcgcttcgcaggaaggcgag
gcaatcatcaagcgcgcgccgttcgtcgacctggtgttcggcccgcagaccctgcaccgc
ctgccggaactgatccgtgcacggcgcgagcagaagcgcccgcaggtggacatcagcttc
cccgagatcgagaagttcgaccgcctgccggaaccgcgcgccgaaggcgcttcggcgttc
gtgtcgatcatggaaggctgctcgaagtactgctcgttctgcgtggtgccctacacccgc
ggcaccgaagtcagccgcccgttcgaggacgtggtggtggaagtggcgcagctggccgcg
cagggcgtgcgcgagatcaacctgctcgggcagaacgtcaatgcctatcgcggcccctat
ggagatggcgagttcgccgatctcggcctgctgatccggaccatcgccgagatcgacggc
gtcggccgcatccgcttcaccacctcgcacccgctggagttcagcgattcgctgatcgat
gcgttccgcgacgtgccgcagctggccaacttcctgcacctgccggtgcaggccggcagc
gaccgcgtactatcggcgatgaagcgcggctataccgcgctggaattcaagtcgaagatc
cgcaagctgcgcgcggtgcgcccggacatctcgatcagctcggacttcatcgtcggcttc
cccggcgaaaccgatgccgatttcgagaaaacgatgaagctgatcgaggacatcggcttc
gaccacagcttctccttcatctattcgcgtcgcccgggtacaccggctgcggatctggag
gacacgatcagcgatgccgagaagcacgcgcgcctgtcgcgcctgcaggaacgcatcaat
gcgcacgctgccggcatttccgaaaagatggtcggtaccgtgcagacggtgctggtggaa
ggtccttcgcggaagaacccgaacgaactgaccggcaagaccgagaacatgcgttcggtg
aacttcccggcgccggcacggttgatcggccagttcgtggacgtggtgatcaccgaagcg
ctgaccaattcgctgcgcgcgcgggtggtagcggagtaa
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