Stenotrophomonas sp. ASS1: MG068_07395
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Entry
MG068_07395 CDS
T06051
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
stes
Stenotrophomonas sp. ASS1
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stes03016
]
MG068_07395
Enzymes [BR:
stes01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MG068_07395
Transfer RNA biogenesis [BR:
stes03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MG068_07395
Prokaryotic type
MG068_07395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QBL40343
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All DBs
Position
1582920..1583951
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AA seq
343 aa
AA seq
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MIPLPLAFGAPLLTARIRTTPDDFQVDELPAFEATGEGEHLLLHIRKRGANTVHVAKVLA
KWAGLPEMAVSYAGMKDRHAVTTQRFSVHLPKRIAPDLAELASDEIEVLEATWHNRKLQR
GALAGNRFKLVLREVQGDAAAISERLQQIAERGLPNWFGEQRFGRDGGNVPAALAMFGGR
RMRKEQRSLLLSAARSALFNRVLAARVEQGNWDQPLEGEVWMLNGSRSVFGPEPYTDVLA
ERLARFDIHPSAPLWGEGELRSTDAARELELAALDDEESKALRAGLEDARLKQERRALRL
RPALLQHQWLAEDVLELSFALPPGCYATAVLHELGPVEDASQA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgctgccgttggcgtttggtgcaccgttgctgacggcgcgcatccgcaccacg
ccggacgatttccaggttgacgaactgccggccttcgaggccaccggtgaaggcgagcac
ctgctgctgcacatccgcaagcgcggcgccaacaccgtgcatgtggccaaggtgctggcc
aagtgggcgggcctgccggaaatggcggtgagctacgccggcatgaaggatcgccatgcg
gtcaccacccagcgtttcagcgtgcacctgcccaagcgcattgcgccggacctggccgag
ctggccagtgacgagatcgaagtgctcgaagccacctggcacaaccgcaagctgcagcgc
ggtgcactggcaggcaaccgcttcaagctggtgctgcgtgaagtgcagggcgatgccgca
gcgatcagcgaacgcttgcagcagattgccgagcgcggcctgccgaactggtttggcgag
cagcgctttggccgcgacggcggcaatgtgccagcggcactggcgatgttcggggggcgc
cgcatgcgcaaggaacagcgatcgctgctgctgtcagccgctcgttcggcgctgttcaac
cgcgtgctggccgcgcgcgtggagcagggcaactgggaccagccgctggaaggcgaagtc
tggatgctcaatggcagccgcagcgtgttcggtcccgagccgtacaccgacgtgctggcc
gagcgcctggcgcgtttcgacatccatcccagcgcgccgctgtggggtgaaggcgagctg
cgcagcaccgatgcggcacgcgagctggagctggccgcgctggacgacgaggaatcgaag
gcgctgcgggccggcctggaagacgcgcgcctgaagcaggagcgccgcgcgctgcgcctg
cgcccggcgctgctgcagcaccagtggctggccgaagacgtgctggagctgtcattcgcg
ctgccgccaggctgctacgccaccgccgtactgcacgaactcggccccgtcgaggacgcc
tcgcaggcctga
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