Stenotrophomonas sp. ASS1: MG068_07990
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Entry
MG068_07990 CDS
T06051
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
stes
Stenotrophomonas sp. ASS1
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stes03400
]
MG068_07990
Enzymes [BR:
stes01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MG068_07990
DNA repair and recombination proteins [BR:
stes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MG068_07990
Prokaryotic type
MG068_07990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QBL40449
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All DBs
Position
1706927..1708342
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AA seq
471 aa
AA seq
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MSVALVWFRRDLRLQDNPALQAALDAGHDVVPVYIHAPHEEGEWVPGAASDAWRHRSLGA
LDADLRVRGSSLVLRSGDSLPALQLLIEQTGAGAVYWNRKYEPATQPRDATIKRTLREQG
IDAQSCNGSLLFEPWDIATQQGQPYKVFTPYWRNVLSHWRLPALQAAPEALATHAVDSLA
LDDLQLAPTLDWDTGFWEHWQPGEAGALEALSVFEDGALRGYREQRDLPDRVGTSRMSPH
LHFGEIAPWRIAHALEGLRSAGTDADIDGYLRQLGWRDFASHLLHHFPKTPTDNLNPRFD
RFPWATPSAAQLHDWQRGNTGVPIVDAGLRELWHTGYMHNRVRMIVASYLCKHLRAHWLH
GARWFWDTLVDADLANNTMGWQWVAGTGADAAPYFRVFNPVTQAEKFDPQARYISRWVPE
LAALPVKARFAPWQHPLLLAAHAPGYPRTPLVDLAAGRDAALAAYRQSGAG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtagcgttggtatggttccgccgtgatctgcggctgcaggacaatccggccctg
caggccgcgctggatgcgggccacgacgtggtgccggtctacatccatgcgccgcacgag
gaaggcgagtgggtgcctggcgcggcctccgatgcgtggcgccatcgttcactgggcgca
ttggatgccgacctgcgcgtgcgcggttcgtcgctggtgctgcgcagtggtgacagcctg
ccggccctgcagttgctgatcgagcagaccggcgccggggcggtgtactggaaccgcaag
tacgagccggccacccagcctcgcgacgccaccatcaagcgtacgctgcgcgagcagggc
atcgatgcgcagagctgcaatggcagcctgctgttcgagccgtgggacatcgccacccag
cagggccagccgtacaaggtattcacgccgtactggcgcaatgtactcagtcattggcgc
ctgcccgcgctgcaggccgcaccggaagcattggcgacgcacgcagtcgacagcctggca
ttggatgatctccagttggcaccgacgctggactgggataccggcttctgggagcactgg
cagccgggtgaagccggtgcgctggaagcgctgtccgtgttcgaggacggtgcgctgcgc
ggctaccgcgagcagcgtgacctgccagatcgcgtgggcacctcgcggatgtcgccgcac
ctgcatttcggcgagatcgcaccctggcgcattgcccatgcgctggaagggctgcgtagt
gccggcaccgacgccgacatcgacggctatctgcgccagctgggctggcgtgacttcgcc
tcccacctgttgcatcacttcccgaagacgccgaccgacaacctcaacccgcgctttgac
cgtttcccgtgggccacaccgagtgccgcgcagctgcacgactggcagcgaggcaacacc
ggcgtgccgatcgtcgatgcaggcctgcgcgagctgtggcacaccggttacatgcacaac
cgggtgcggatgatcgtggccagctatctgtgcaagcacctgcgcgcgcactggctgcat
ggcgcgcgctggttctgggacaccctggtcgatgccgacctggccaacaacacgatgggc
tggcagtgggtggccgggaccggtgccgatgccgcgccttacttccgcgtgttcaacccg
gtcacccaggccgagaagttcgacccccaggcccgctacatcagccgctgggtgcccgaa
ctggccgcgctgccggtgaaggcgcgcttcgcgccgtggcagcatccgctgctgctggcc
gcgcatgccccgggctatccgcgtacgccgctggtggacctggccgcgggccgcgacgcc
gcattggcggcttaccgccagtcgggggcggggtaa
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