Stenotrophomonas sp. ASS1: MG068_08715
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Entry
MG068_08715 CDS
T06051
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
stes
Stenotrophomonas sp. ASS1
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stes03009
]
MG068_08715
Enzymes [BR:
stes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MG068_08715
Ribosome biogenesis [BR:
stes03009
]
Prokaryotic type
rRNA helicases
MG068_08715
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
AAA_30
PRAI
Motif
Other DBs
NCBI-ProteinID:
QBL40585
LinkDB
All DBs
Position
complement(1827520..1828896)
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AA seq
458 aa
AA seq
DB search
MTDFSTLPLSPALQPGLDALGYTTLTPVQAQSLPAILDGRDVIAQAPTGSGKTAAFGLGL
LQSIDPSLIRVQALVLCPTRELADQVGKQIRKLATGIPNLKLLLLVGGVPLGPQLASLEG
HDPHVVVGTPGRVQELARKRALNLGAVRMLVLDEADRMLDMGFEEPIREIAGRTHRDRQS
LLFSATFPDSIRAMARDLLRDAVEVTVEGADQAPAIRHLFCEVEPAHRQKALAGLLLKYT
PESAVVFCNTRKDVDEVANSLQQFGFSALALHGDMEQRDREEVLLLLANRSCNVLVASDV
AARGLDVEELAAVINYELPTDVESYQHRVGRTGRAGASGLAISLVAGREKTRAEAIEAQM
GQPLDWQKTPLATSRPAELPQAAMRTLRIDGGKTDKLRPGDILGALTGDAGLSSKFIGKI
AIFPTRSYVAIAREQANKAVAKLEAGKIKGRRFRVRMM
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgactgacttctcgactctgccgctgagcccggccctgcagcccggcctggacgccctc
ggctacaccaccctcacccccgtgcaggcgcagagcctgccggccatcctggatggccgc
gatgtgatcgcacaggcgccgaccggcagcggcaagaccgccgccttcggcctgggcctg
ctgcagtccatcgaccccagcctgatccgtgtgcaggcgctggtgctgtgcccgacccgc
gaactggccgatcaggtcggcaagcagatccgcaagctggccaccggcatccccaacctg
aagttgctgctgctggttggcggcgtaccgctgggaccgcagttggcatcgctggaaggc
cacgatccgcatgtggtggtcggcacgcccggccgcgtgcaggaactggcacgcaagcgt
gcgctgaacctgggcgcggtgcgcatgctggtgctggatgaggccgaccgcatgctcgac
atgggcttcgaagagccgatccgcgagatcgccggccgcacccacagggatcgccagagc
ctgctgttctcggccaccttccccgacagcatccgcgccatggcgcgtgacctgctgcgc
gacgcggtggaagtgaccgtggaaggcgccgaccaggccccagccatccgccacctgttc
tgcgaggtggaaccggcacatcgccagaaggcactggccggcctgctgctgaagtacacg
ccggaatcggcggtggtcttctgcaacacccgcaaggacgtggacgaagtggccaactca
ctgcagcagttcggcttctccgcactggccctgcatggcgacatggaacagcgcgatcgc
gaggaagtgttgttgctgctggccaaccgcagctgcaacgtactggtggccagcgatgtg
gccgcacgcggcctggacgtggaagagctggcggcggtgatcaactacgagctgccgacc
gacgtggagagctatcagcaccgcgtgggccgtactggccgtgccggtgccagcggcctg
gcgatcagcctggtggccggccgcgagaagacccgcgccgaagccatcgaagcgcagatg
ggtcagccgctggactggcagaagacgccgctggcgacttcgcgcccggccgagctgccg
caggccgcgatgcgcacgctgcggatcgacggcggcaagaccgacaagctgcgcccgggc
gacattctcggtgcactgaccggcgacgccggcctgtcgagcaagttcatcggcaagatc
gcgatcttcccaacccgctcctatgtggcgatcgcgcgagagcaggccaacaaggccgtg
gccaagctggaagccggcaagatcaagggccgacgtttccgcgtgcggatgatgtga
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