Stenotrophomonas sp. ASS1: MG068_10640
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Entry
MG068_10640 CDS
T06051
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
stes
Stenotrophomonas sp. ASS1
Pathway
stes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MG068_10640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stes03400
]
MG068_10640
DNA repair and recombination proteins [BR:
stes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MG068_10640
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MG068_10640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
DnaJ_CXXCXGXG
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
MCR
Motif
Other DBs
NCBI-ProteinID:
QBL40947
LinkDB
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Position
complement(2262023..2264671)
Genome browser
AA seq
882 aa
AA seq
DB search
MSNTPFGESSCAAAASGCVEVRGAREHNLKNVDVSIPRNALVVFSGVSGSGKSSLAFGTV
FAEAQRRYFESVAPYARRLIDQAGVPDVDAIDGLPPAVALQQQRGASNARSSVGSVTTLS
SLVRMMYSRAGAYPANQPMLYAEDFSPNTPQGACTTCHGLGHVYEVTEALMVPDPSLSIR
DRAIASWPPAWHGQNLRDILVTLGYDIDVPWKTLPKKDRDWILFTEDAPSVPVYAGFTPA
ETRAALKRKQEPSYMGTYTGARRYVLHTFANTQSALMRKRVSRYMEGRLCPACHGKRLKP
EALSVTFAGVDIGEFMRLPLDQLAALLEPIAQGDFGAHSTGARTNRSATPRDRARRAASG
QATHEGAPDVRLTSALSEEKRLAAQRLAGGVMARVRQLRDLGLGYLSLDRATPTLSAGEL
QRLRLATQLSSLLFGVLYVLDEPSAGLHPADSQALYDALERLRDGGNSVFVVEHDLELMR
RAQWLVDVGPEAGEHGGQVLYSGEPDGLRQIQESRTAQYLFDQVPAPASRQRSANSWLEL
KGIHRHNLQGVDAQVPLGLLTAVTGISGSGKSSLMAQALPELLLLHLGHEPADDRADSAP
TDGPTVIETTRGTLAGDMDAIQRVVQVDQKPIGRTPRSNLATYTGLFDHVRKLFAATPAA
RRRRFDAGRFSFNVAKGRCETCEGEGFVSVELLFMPSVYAPCPTCHGARYNEATLKVQWN
DRNIAEVLQMTVDQAHAFFSEEEAIARPLQLLQEIGLGYLRLGQPATELSGGEAQRIKLA
TELQRSQRGRTLYVLDEPTTGLHASDADRLLLQLQRLVDAGNTVVMIEHDMRAVAQADWV
IDVGPGAGGAGGTIVAKGTPQQVARAKGSRTAPFLARELALM
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataccccctttggtgagtcgtcatgtgctgccgccgccagcggttgcgtcgag
gtgcgcggcgcacgcgagcacaacctcaagaatgtcgacgtctccatcccacgcaatgca
ctggtggtgttctccggggtgtcgggttcgggcaagtcgtcgttggccttcggtactgtc
ttcgctgaggcgcagcggcgctactttgagtctgttgcgccgtatgccaggcgcctgatc
gaccaggcgggcgtgcccgatgtggatgccatcgacgggctgccgccggcggtggccctg
cagcaacagcgcggggccagcaatgcgcgctcgtcagtgggcagcgtgaccaccctgtcc
agcctggtgcgcatgatgtactcgcgtgcgggtgcgtacccggccaaccagcccatgctg
tatgccgaggacttctcacccaacacgccgcagggcgcctgcaccacctgccatggcctg
gggcatgtctacgaagtgaccgaagcgctgatggttccggacccctcgctgagcatccgc
gatcgcgccatcgcctcctggccgccggcatggcatggccagaacctgcgcgacatcctg
gtcacgctcggctacgacatcgacgtaccgtggaagacgctgccgaagaaggaccgggac
tggatcctgttcaccgaagacgcgcccagcgtgccggtctatgccgggttcacgcccgca
gagacgcgtgccgcgctcaagcgcaagcaggagcccagctacatgggcacctataccggc
gcgcgccgctacgtgctgcacacctttgccaatacccagagcgcgctgatgcgcaagcgc
gtatcgcgctacatggaaggccggttgtgcccggcgtgccacggaaagcgcctgaagccg
gaggcgctctcggtcacctttgccggggtggatatcggtgagttcatgcggctgccgctg
gaccagctggcggcgctgctggagcccatcgcacaaggtgatttcggcgcgcacagcacg
ggcgctcgcaccaacaggagcgcgacaccccgcgatcgcgcccggagggccgcgagtggc
caggcgactcacgagggtgcccccgacgtgcggctgacctccgccctgtccgaagagaag
cgcttggcagcacaacgactggcaggcggggtcatggcccgtgtacggcaattgcgtgac
ctgggcctggggtacctctcgctggaccgcgccacgccaaccctgtcggccggcgaactg
cagcgcctgcggctggccacccagctcagctcgttgctgtttggcgtgctgtatgtgctc
gatgaaccctcggccggcctgcatcctgccgacagccaggcgctgtacgacgcgcttgag
cggctgcgcgacggcggaaactcggtattcgtggttgaacatgacctggagttgatgcgc
cgcgcacagtggctggtcgatgttggaccggaagcaggcgagcacggtggccaggtcctc
tacagcggcgagccggacggcctgcgccagatccaggagtcgcgcacggcgcagtatctg
ttcgaccaggtgccggcacccgccagccgccagcgcagcgcgaacagctggctggaactg
aagggcatccaccgccacaacctgcagggcgtggacgcacaggtgccgctggggctactg
acggcggtgaccggcatttccggctcaggcaaatccagcctgatggcgcaggcgctgccc
gagctgttgctgctgcacctcgggcatgagcctgccgacgaccgcgccgatagcgcgccc
accgacggaccgaccgtgatcgaaacgacgcggggcacattggcaggcgatatggacgcg
atccagcgggtggtgcaggtcgaccagaagccaatcggccgcacgccgcgctccaacctg
gccacctataccgggctgttcgatcacgtgcgcaagctgttcgccgcaacgccggccgcg
cgccgccgccgtttcgatgccggccgcttctcgttcaacgtggccaagggccggtgcgag
acctgcgagggcgagggtttcgtcagcgtcgagctgctgttcatgcccagcgtctatgcg
ccgtgccccacctgtcatggcgcccgctacaacgaagccacgctgaaggtgcagtggaat
gaccgcaacatcgccgaggtcctgcagatgacggtcgaccaggcgcatgcgttcttcagc
gaggaagaggccattgcccggccgctgcagttgctgcaggagatcggcctgggctacctg
cggctgggccagccagccacggagctttccggcggtgaggcgcaacgcatcaagctggcc
accgagctgcagcgcagccagcgcgggcgcacgctgtacgtattggacgaacccactacc
ggcctgcatgcgtcggacgcagacaggctgctgctgcagctgcagcggctggtggacgcg
ggcaatacggtggtgatgatcgagcatgacatgcgcgcggttgcacaggcggactgggtg
attgacgtaggccccggagctggcggggcagggggcaccatcgtcgcgaaaggaacgccg
caacaggtggctcgcgccaaaggcagcaggacggcgccgttccttgccagggagctggcg
cttatgtag
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