Stenotrophomonas sp. ASS1: MG068_12740
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Entry
MG068_12740 CDS
T06051
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
stes
Stenotrophomonas sp. ASS1
Pathway
stes03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MG068_12740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stes03019
]
MG068_12740
03009 Ribosome biogenesis [BR:
stes03009
]
MG068_12740
Messenger RNA biogenesis [BR:
stes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MG068_12740
Ribosome biogenesis [BR:
stes03009
]
Eukaryotic type
Pre-60S particles
RNases
MG068_12740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Annexin
Motif
Other DBs
NCBI-ProteinID:
QBL41339
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All DBs
Position
complement(2736132..2736704)
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AA seq
190 aa
AA seq
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MADNGAANERLIWIDLEMTGLDTDNDSIIEIATVVTDAQLNVLAEGPEFAIHHPLETLEA
MDEWNRNQHRRSGLWQRVVDSTTTLGQAEAQTVNFLAQWIPAGLSPMCGNSICQDRRFLH
RQMPRLEKYFHYRNLDVSTVKELAKRWAPNVAAGVGKNSNHTALSDVHDSIAELRHYRQF
MGALSGLPTA
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacggcgcggccaacgaacgactgatctggatcgacctggagatgaccggg
ttggataccgacaatgattcgatcatcgagatcgcgaccgttgtcaccgatgcccagctc
aacgtgttggccgaaggcccggaatttgccatccaccacccgctggaaacgctggaagcg
atggacgagtggaaccgcaaccagcaccgccgttcgggcctgtggcagcgcgtggtggac
agcaccaccaccctcggccaggccgaggcacagacggtgaatttcctggcgcagtggatc
ccggccggcctgtcgccgatgtgtggtaactccatctgccaggaccgccgcttcctgcac
cgccagatgccgcgcctggagaagtacttccactatcgcaatctggacgtgtccacggtg
aaggaactggccaagcgctgggcgccgaacgtggccgccggcgtcggcaagaacagcaac
cacaccgcactgagcgacgtgcatgactcgatcgccgagctgcgccactaccgccagttc
atgggcgcgctgtcgggcctgccgactgcttga
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