Stenotrophomonas sp. ASS1: MG068_13935
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Entry
MG068_13935 CDS
T06051
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
stes
Stenotrophomonas sp. ASS1
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stes03009
]
MG068_13935
Enzymes [BR:
stes01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
MG068_13935
Ribosome biogenesis [BR:
stes03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MG068_13935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QBL41562
LinkDB
All DBs
Position
2988627..2990273
Genome browser
AA seq
548 aa
AA seq
DB search
MSDTPRKLSLNKLSLKREATSEQFKLEERLHKVLAQAGLGSRRALEQRIAEGLVKVNGEV
AQTGMSVKSGDKIELDGRGFVATALAEPSRVLVYNKPEGEVTTRDDPEGRPTVFESLPPL
KGARWIAIGRLDINTTGLLLATTDGELANAMMHPSFEVEREYVVRVRAPEGEEKVSDAIV
DRLTRGVALEDGPAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRT
RYGKVSLPRELARGHSVELGTAQVEALRAQLKLEEGAPSALTLQPVIGQRRAAKTTVRVR
EGGRGNAYVNGHNTADEGRELRRFDNVREDRGRGRGGKGGGFKGGLTVSGEAAAKQSQKP
FKQRAQKNDRSLPEGNPAAFRTWYVPDGVSTGPSGHRNAGPGARGPGARGPGAGGQGRPY
GKPKGPGAGAGGGQGRGGFGGEGRGGAGGQGRPAGAGNRSQGQGNKHPYGHPGNAPSFPS
DHATPGFNPYGSPKPAQGARPGGRGPGGGNRGPGGNRGPGGPGGNRGPGGPGGNRGPGGP
RRSGPRGG
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacccctcgcaagctgtcgttgaacaagctctcgctcaagcgcgaagccacc
tccgaacagttcaagttggaagaacgcctgcacaaggtgctggcacaggccggccttggc
tcgcgccgcgcgctggaacagcgcattgccgaaggcctggtcaaggtcaacggtgaagtc
gcgcagaccggcatgtcggtcaagagcggcgacaagatcgaactggatgggcgtggcttc
gtcgccaccgccctggccgagccgtcgcgcgtgctggtctacaacaagccggaaggcgaa
gtgaccacccgcgatgatccggaaggccgcccgaccgtgttcgaatcgctgccgccgctg
aagggcgcgcgctggatcgcgatcggccgcctcgacatcaacaccaccggcctgctgctg
gccaccaccgacggtgaactggccaacgccatgatgcacccgtcgttcgaggtcgaacgc
gaatacgtggtgcgcgtgcgtgcaccggaaggcgaggaaaaggtctccgacgccatcgtc
gaccgcctcacccgtggcgtggcactggaagacggcccggccaagttcgacgagatcgaa
cgcatcggcggcaccgattcgcacgactggttccgcgtcgtggtgaaggaaggccgcaac
cgcgaagtgcgtcgtctttgggaatcgcagggctgccaggtcagccgcctgaagcgcacc
cgctacggcaaggtgagcctgccgcgcgaactggcccgtggccattcagtggaactgggc
accgcgcaggttgaagccctgcgcgcgcagctgaagctggaagaaggcgcaccgtcggca
ctgaccctgcagccggtgatcggccagcgccgcgccgccaagaccaccgtgcgcgtgcgc
gaaggtggccgcggcaacgcctacgtcaacggtcacaacaccgctgacgaaggccgcgag
ctgcgtcgcttcgacaacgtgcgcgaagaccgcggccgtggtcgcggtggcaagggcggc
ggcttcaagggcggcctgacggtcagcggtgaagcggcagccaagcagtcgcagaagccg
ttcaagcagcgtgcccagaagaacgatcgttcgctgccggaaggcaacccggccgcgttc
cgcacctggtacgtgccggatggcgtgagcaccggcccgagcggccatcgcaacgccggt
ccgggcgcacgcggccccggtgcccgtggtccgggtgcgggcggccagggccgtccgtac
ggcaagccgaagggtccgggtgcaggcgccggtggcggccagggccgtggcggtttcggt
ggtgaaggccgtggcggcgcaggcggccagggtcgtccggccggtgcgggcaaccgctcg
cagggccagggcaacaagcacccgtacggccatccgggcaatgccccgagcttcccgtcc
gaccacgccacgccgggcttcaatccgtatggcagccccaagcccgcgcagggcgcccgt
ccgggcggtcgcggcccgggcggcggcaaccgtggcccgggcggcaatcgcggccccggc
ggtccgggtggcaaccgtggcccgggcggccccggcggcaaccgcggtccgggcggcccg
cgccgcagcggcccgcgcggcggctga
DBGET
integrated database retrieval system
