Stenotrophomonas sp. ASS1: MG068_14300
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Entry
MG068_14300 CDS
T06051
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
stes
Stenotrophomonas sp. ASS1
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stes03016
]
MG068_14300 (rnd)
Enzymes [BR:
stes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MG068_14300 (rnd)
Transfer RNA biogenesis [BR:
stes03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MG068_14300 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QBL41630
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All DBs
Position
3066925..3068004
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AA seq
359 aa
AA seq
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MATWITTPAELDAYFQQRPTRIGLDTEFIRERTFWPQLALVQMAVGQDILLIDPLIPGMT
EALAPWLADESITKVMHSASEDLVAFKWACGVLPRPLFDTQIGASLAGIGGGMGYQKLVA
EITGVALAKGETRSDWMRRPLSESQLQYAADDVEHLFALHDAIDARLQALGRQQWLHDDG
ERLLASVANDEDRWPHLSMRSAQFLDAAAQHRLLRLLRWRDVQARSSDRPRSWILDNELA
ATLARTPPADAAALGQLFEQFPKAPRKLAGAVWQALETPLADEADAPLALPANDSNKQAL
KKLQDAVAERSRELGLPDGILASRKHLESYLERRQWPAALAGWRQQELESRLQALLPAR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacctggatcaccacccccgccgagctggatgcgtacttccagcagcgcccgacc
cgcatcggcctggacaccgaattcatccgtgaacgcaccttctggccgcagctggccctg
gtgcagatggcggtcgggcaggacatcctgctgatcgacccgctgattcccggcatgacc
gaggcgctggcgccgtggctggccgatgaatccatcaccaaggtgatgcacagcgccagc
gaagacctggtcgccttcaagtgggcgtgcggcgtgctgccacggccgctgttcgacacc
cagatcggcgcctcgctggccggcatcggcggtggcatgggctaccagaagctggtggcg
gaaatcaccggcgtcgcactggcaaagggtgagacccgctcggactggatgcgccgaccg
ctgtcggagtcgcagctgcagtacgccgccgacgacgtcgaacacctgttcgcactgcac
gacgccatcgatgccaggctgcaggcgctgggtcgccagcagtggctgcatgacgacggc
gagcgcctgctggccagcgttgccaatgacgaggaccgctggccacacctgtcgatgcgc
tcggcacagttcctcgacgccgccgcacagcaccgcctgttgcgcctgctgcgctggcgc
gatgtgcaggcgcgcagcagcgaccgcccacgcagctggatcctggacaacgaactggcc
gccacgctggcacgcacgccaccggccgatgccgccgcgctgggccagctgttcgagcag
ttcccgaaggcaccgcgcaagctcgctggcgccgtgtggcaggcgctcgagacgccgctg
gccgatgaggccgacgccccgctggcgctgccggccaacgacagcaacaagcaagcgctg
aagaagctgcaggatgccgtggccgaacgcagccgcgagctgggactgccggatggcatc
cttgcctcgcgcaagcacctggaaagctatctggaacgtcgccaatggcccgccgcactg
gccggctggcgccagcaggaactggagtcgcgcctgcaggcgctgctgccggcacgctga
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