Stenotrophomonas sp. ASS1: MG068_14535
Help
Entry
MG068_14535 CDS
T06051
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
stes
Stenotrophomonas sp. ASS1
Pathway
stes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MG068_14535 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stes03019
]
MG068_14535 (pnp)
03016 Transfer RNA biogenesis [BR:
stes03016
]
MG068_14535 (pnp)
Enzymes [BR:
stes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MG068_14535 (pnp)
Messenger RNA biogenesis [BR:
stes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MG068_14535 (pnp)
Transfer RNA biogenesis [BR:
stes03016
]
Prokaryotic type
tRNA degradation factors
MG068_14535 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_KhpA-B
KH_PNO1_2nd
DUF7680
S1_2
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
QBL41671
LinkDB
All DBs
Position
complement(3105958..3108066)
Genome browser
AA seq
702 aa
AA seq
DB search
MAKITKTFQYGKHTVTLETGEVARQASGAVIVKMDDTVLLVTAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYKNEVQIIATVMSLN
PDVDGDIPALIGASAALALAGTPFMGPIGAAKVGYKNGEYILNPTVSELADSQLELVVAG
TSNAVLMVESEAALLSEEVMLGAVTFGHREMQKVINAINELTVEAGTKPSTWEAPAKNDA
LISALKEAIGPRLGEAFQVRDKLQRRDAISAIKKDVVETLAGRVAAEGWNPAELSKEFGE
LEYRTMRDSVLDTKVRIDGRALDTVRPIAVKTGVLPRTHGSSLFTRGETQAIVTITLGTA
RDGQVIDAVAGEYKENFLFHYNFPPFSVGECGRMMGPKRREIGHGRLAKRGVLAVMPSLE
AFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPVKAPVAGIAMGLVKEGERFVVLS
DILGDEDHLGDMDFKVAGTAEGISALQMDIKIEGITEEIMKQALQQAKAGRLHILGEMAH
GLTAPREELSDYAPRLLTIKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIVIAS
VNAIAAQAAKARIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSDRV
EKVGDVLKEGDVVKVKVLEVDKQGRIRLSMKAVEEGDAASAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaatcaccaaaaccttccagtacggcaagcacaccgtcacgcttgagaccggc
gaagtcgcccgtcaggccagcggcgccgtcatcgtcaagatggacgacaccgtactgctg
gtcaccgccgtcgccgccaagagcgcgcgcgaaggccaggacttcttcccgctgaccgtc
gattatcaggaaaagttctacgccggcggccgtatcccgggtggtttcttcaagcgtgaa
ggccgtgcgaccgagaaggaaaccctgatctcgcgtctgatcgaccgtccgatccgtccg
ctgttcccggaagactacaagaacgaagtgcagatcatcgccacggtcatgtcgttgaac
ccggacgtggacggcgacatcccggccctgatcggtgcctccgctgccctggccctggcc
ggcaccccgttcatgggtccgatcggcgctgccaaggtcggttacaagaacggcgagtac
atcctgaacccgaccgtcagcgaactggctgactcgcagctggaactggtcgtcgccggt
acctccaacgccgtgctgatggttgaatccgaagccgcgctgctgtccgaagaagtgatg
ctgggcgccgtgaccttcggtcaccgcgagatgcagaaggtcatcaacgcgatcaacgag
ctgaccgtcgaagccggcaccaagccgtcgacctgggaagccccggccaagaacgacgcg
ctgatctccgccctgaaggaagccatcggcccgcgcctgggcgaagccttccaggtgcgt
gacaaactgcagcgccgtgacgccatctcggcgatcaagaaggacgtggtcgaaaccctg
gctggccgcgtggccgccgaaggctggaacccggccgagctgtcgaaggaattcggcgag
ctggaataccgcaccatgcgtgactcggtgctggacaccaaggtccgcatcgacggccgt
gcgctggacaccgtccgcccgatcgccgtgaagaccggcgtgctgccgcgtacccacggt
tcctcgctgttcacccgcggcgaaacccaggccatcgtgaccatcaccctgggcaccgcc
cgtgacggccaggtcatcgacgccgtcgccggtgagtacaaggaaaacttcctgttccac
tacaacttccctccgttctcggtgggtgagtgcggccgcatgatgggcccgaagcgccgc
gaaatcggccacggtcgcctggccaagcgcggcgtgctggctgtcatgccgtcgctggaa
gccttcccgtacaccatccgcgtcgtctcggaaatcaccgagtcgaacggttcctcgtcg
atggcatcggtctgcggttcgtcgctggccctgatggacgccggcgtgccggtgaaggcg
ccggttgccggtatcgccatgggtctggtcaaggaaggcgagcgcttcgtcgtcctgtcc
gacattttgggtgacgaagatcacctgggcgacatggacttcaaggtggccggtaccgct
gagggcatctccgccctgcagatggacatcaagatcgaaggcatcaccgaagagatcatg
aagcaggccctgcagcaggccaaggctggccgtctgcacatcctgggcgaaatggcccac
ggcctgaccgctccgcgtgaagagctgtcggactacgcgccgcgcctgctgaccatcaag
atccacccggacaagatccgcgaagtgatcggcaagggtggctcgaccatccaggccatc
accaaggaaaccggcacccagatcgacatccaggacgacggcaccatcgtcatcgcttcg
gtcaacgccatcgctgcccaggccgccaaggcccgcatcgagcagatcacctcggacgtc
gagccgggccgcatctacgaaggcaaggtcgccaagatcatggacttcggtgcgttcgtc
acgatcctgccgggcaaggacggtctggtccacgtgtcgcagatctccagcgatcgcgtc
gagaaggtcggcgacgtcctgaaggaaggcgatgtggtcaaggtcaaggtgctggaagtc
gacaagcagggccgtatccgcctgtcgatgaaggccgtggaagaaggcgacgccgccagc
gccgagtaa
DBGET
integrated database retrieval system
