Stenotrophomonas sp. ASS1: MG068_14545
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Entry
MG068_14545 CDS
T06051
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
stes
Stenotrophomonas sp. ASS1
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stes03016
]
MG068_14545
Enzymes [BR:
stes01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MG068_14545
Transfer RNA biogenesis [BR:
stes03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MG068_14545
Prokaryotic type
MG068_14545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QBL41673
LinkDB
All DBs
Position
complement(3108651..3109559)
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AA seq
302 aa
AA seq
DB search
MTRIQFRRLDGILLLDKSTGMSSNAALQVARRLFRAEKGGHTGSLDPLATGLLPLCFGEA
TKIAGLLLGSAKAYDAEIMLGQTTDTDDSEGQVLLQRPVPAISAEALQAALVPLTGNIRQ
RAPIYSALKQGGEPLYVKARRGDVIEAPEREVQVHAIEVLEQQPERLRLRVTCGSGTYIR
SLARDLGESLGCGAHISALRRLWVEPFREPAMVTLDQLRAMVEAGDEAGMDALLLPLAAG
LAEYPRVDLDADQAHRFCVGQRQRDLSWPRGLVAVFGPDDAVQGLGQVDESGLLAPQRRF
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaattcagttccgccgcctggatggcatcctgctgctcgacaagtcgaccggc
atgagctccaacgccgccctgcaggtggcccgtcgcctgttccgtgccgaaaagggtggc
cataccggcagcctcgatccgctggccaccggcctgttgccgctgtgcttcggcgaggcg
accaagattgccggtctgctgctcggctcggccaaggcctacgacgccgagatcatgctg
ggccagaccaccgacactgacgattccgaaggccaggtgctgctgcagcggccggtgccg
gcgatcagtgccgaggccctgcaggcggcgctggtgccgctgaccggcaacatccgccag
cgtgccccgatctattcggcgctgaagcagggtggggagccgctgtatgtgaaggcccgc
cgcggtgacgtcatcgaagcgccggaacgcgaggtgcaggtgcatgccatcgaggtactg
gagcagcagccggaacggctgcggctgcgcgtgacctgtggttccggcacctatatccgc
agcctggcccgcgacctcggcgaaagcctgggttgtggcgcccacatcagcgcgctgcgc
cggctctgggtcgagccgttccgcgagcctgccatggtcaccctggaccagctgcgggcg
atggtcgaggcgggcgacgaggccggcatggacgcgctgctgctgccgctggcggccggc
ctggctgaatacccgcgggtcgacctcgatgccgaccaggcccaccgcttctgcgtcggc
cagcgccagcgcgatctgtcctggccgcgtggcctggtggcggtgtttggtccggacgac
gctgtccagggcctgggccaggtcgacgagagcggcctgctggccccgcagcgtcgtttc
aacctctga
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