Stenotrophomonas sp. ASS1: MG068_14560
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Entry
MG068_14560 CDS
T06051
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
stes
Stenotrophomonas sp. ASS1
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stes03021
]
MG068_14560
03009 Ribosome biogenesis [BR:
stes03009
]
MG068_14560
Transcription machinery [BR:
stes03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
MG068_14560
Ribosome biogenesis [BR:
stes03009
]
Prokaryotic type
rRNA transcription factors
MG068_14560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QBL41676
LinkDB
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Position
complement(3112914..3114425)
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AA seq
503 aa
AA seq
DB search
MSKELLLVVDAVANEKGVPREVIFDAIEAALASAAKKRYPDEEVLTRVVIDHKDGSYETF
RRWEVVADDVVMESPDRQIRLMDAVDEAEGVDVGDYIEEQIENPDFGRIAAQAAKQVIVQ
RVREAERQQVVDAWKDRVGELITGVVKRAERGNIYVDLGGNAEGFIPKDKGIPRDVLRAG
DRVRGYLAEVRSEPRGPQLFISRAAPEFMIELFKLEVPEVGQGLVEIKACARDPGDRAKI
AVLAHDQRTDPIGACIGMRGSRVQAVSNELNGERVDIVLWNDNPANFVINAMAPAEVQSI
IVDEDKHSMDLAVAEDRLAQAIGKGGQNVRLASRLTGWQLNVMTQDQVTAKSEAEQASAR
QLFMDKLEVDEEIAGILVSEGFGTVEEIAYVPVGELLAVEGFDEDIVEELRARARDALLN
EALAVEEGLEDGQPAQDLLSLKGMDEATAYALAGHGVRTSEDLSDLAADEVMDFGIEGLD
QARAAALILAARAEEIARLERGE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaactgttgctggtagtcgacgcggtcgccaacgagaagggcgtgccgcgt
gaagtgatcttcgatgccatcgaggccgccctggcctcggcagcgaagaagcgctatccc
gacgaggaagtgctgacccgcgtggtcatcgaccataaggatggcagctacgaaaccttc
cgtcgctgggaagtggtggccgatgacgtggtcatggaatcgccggaccgccagatccgc
ctgatggacgccgtcgatgaagccgaaggcgtggacgtcggcgactacatcgaagagcag
atcgagaacccggacttcggccgcattgccgcccaggccgccaagcaggtcatcgtccag
cgcgtgcgcgaagccgagcgccagcaggtcgtggatgcatggaaggatcgcgtgggtgag
ctgatcaccggtgtggtcaagcgcgccgagcgcggcaacatctatgtcgacctcggtggc
aacgccgaaggcttcatcccgaaggacaagggcattccgcgcgacgtgctgcgcgccggt
gaccgcgtgcgcggctacctggccgaagtccgttcggaaccgcgtggcccgcagctgttc
atcagccgcgccgccccggaattcatgatcgagctgttcaagctggaagtgccggaagtc
ggccagggcctggtggaaatcaaggcctgcgcccgcgatccgggcgaccgcgccaagatc
gccgtgctcgcccacgaccagcgcaccgatccgatcggtgcctgcatcggcatgcgcggt
tcgcgcgtgcaggccgtgtccaacgagctcaatggcgagcgcgtggacatcgtgctgtgg
aacgacaacccggccaacttcgtcatcaacgcgatggcgccggccgaagtgcagtcgatc
atcgtcgatgaagacaagcactcgatggacctggccgttgccgaagaccgcctggcccag
gcgatcggcaagggcggccagaacgtgcgcctggccagccgcctgaccggctggcagctc
aacgtgatgacccaggaccaggtcaccgccaagtcggaggccgagcaggcttcggcccgc
cagctgttcatggacaagctggaagtggacgaggaaatcgccggcatcctggtgagcgaa
ggcttcggcaccgtcgaggaaatcgcatatgtcccggtcggcgaactgctggccgtggaa
ggtttcgacgaagacatcgtcgaagagctgcgcgctcgtgcccgcgatgcgctgctcaat
gaggccctggcagtcgaggaaggccttgaagacggccagccggcgcaggatctgctgtcc
ctgaagggcatggacgaagccaccgcgtatgcgctggccggccacggcgtgcgcaccagt
gaggacctgtccgacctggccgccgacgaggtcatggacttcggcatcgaagggctggat
caggcgcgcgccgctgcgctgatcctggccgcacgtgccgaggagatcgcccgactggaa
cgcggcgaatga
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