Stenotrophomonas sp. ASS1: MG068_16310
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Entry
MG068_16310 CDS
T06051
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
stes
Stenotrophomonas sp. ASS1
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stes03009
]
MG068_16310
Enzymes [BR:
stes01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
MG068_16310
Ribosome biogenesis [BR:
stes03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MG068_16310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TTC3_9th
Motif
Other DBs
NCBI-ProteinID:
QBL41993
LinkDB
All DBs
Position
complement(3515941..3516930)
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AA seq
329 aa
AA seq
DB search
MSEQPSESARQAIVPDTAAGRRFDAVVAELFPEYSRSRLTEWIKAGEVLLDGAQVRPRDP
LRGGELVTLNVVLETQTDAQPEDIPLDVLFEDEHLLVINKPVGLVVHPGAGNHSGTLVNA
LLFRDPSVAVLPRAGIVHRLDKDTSGVMVVAKTLEAQTALVEQLAARDVHRQYLAIVMGA
LVAGGTADAPIDRHPRDRLKMAVREDGKEAITHYRLRERFRAHTALECRLETGRTHQIRV
HMAHVRHPIIGDPLYGGALKLPKGASDELVAALRGFKRQALHAETLEFTHPITGEPVRNT
APVPDDMLHLMKVLREDSEAFAARERDRW
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaaccctctgaatcggcccgccaggccatcgtccccgacactgcggccggc
cgtcgtttcgacgccgtggtggccgaactgttccccgaatactcgcgttcgcgcctgacc
gagtggatcaaggccggtgaggtgctgctggacggcgcccaggtgcgcccgcgcgatccg
ctgcgcggcggcgagctcgtgaccctcaacgtggtgctcgagacccagaccgacgcccag
ccggaggacatcccgctggacgtgctgttcgaggacgagcacctgctggtgatcaacaag
ccggtcggcctggtggtgcacccgggcgcgggcaaccacagcggcaccctggtcaacgcc
ctgctgttccgcgacccgtcggtggcggtgctgccgcgcgccggcatcgtgcaccgcctg
gacaaggacaccagcggcgtgatggtggtggccaagaccctggaagcgcagaccgcactg
gtcgagcagctggccgcgcgcgacgtgcaccgccagtacctggccatcgtgatgggtgcg
ctggtggccggcggtaccgccgatgccccgatcgaccgccacccacgcgaccgcctgaag
atggccgtgcgcgaggacggcaaggaagcgatcacccattaccgcctgcgcgagcgcttc
cgtgcgcacactgcgctggagtgccgcctggaaaccggccgtacccatcagatccgcgtg
cacatggcgcatgtgcgccatccgatcatcggtgacccgctgtacggcggtgcgctgaag
ctgcccaagggcgccagcgatgagctggtagccgcgctgcgcggcttcaagcgccaggca
ctgcacgccgagaccctggagttcacgcacccgatcaccggtgagccggtgcgcaacacc
gcgccggtgccggacgacatgctgcacctgatgaaggtgctgcgcgaagacagcgaagcc
ttcgccgcacgcgagcgggaccgctggtga
DBGET
integrated database retrieval system
