Stenotrophomonas sp. ASS1: MG068_18555
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Entry
MG068_18555 CDS
T06051
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
stes
Stenotrophomonas sp. ASS1
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stes03032
]
MG068_18555
03400 DNA repair and recombination proteins [BR:
stes03400
]
MG068_18555
Enzymes [BR:
stes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MG068_18555
DNA replication proteins [BR:
stes03032
]
Prokaryotic type
DNA Topoisomerases
MG068_18555
DNA repair and recombination proteins [BR:
stes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MG068_18555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QBL42410
LinkDB
All DBs
Position
4024263..4026749
Genome browser
AA seq
828 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDYTVLASYGHVRDLIPKEGAVDPDNGFAMHYDVIDKN
EKHVDAIAKAAKGADDILLATDPDREGEAISWHIAEILKERGLVKDKPMQRVVFTEITPR
AIKEAISQPRAIASDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFIAREYWSIAAECAHPSQHFNAKLIKLDGQKFEQFTITDGDTAEAARLRIQQ
AAQGSLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVAIGDE
GTVGLISYMRTDSVNLSQDALAEIRDVIARDYGIASLPDQPNTYQTKSKNAQEAHEAVRP
TSALRTPAQVARYLTDDERKLYELIWKRAVACQMIPATLNTVSVDLSAGSEHVFRASGTT
VVVPGFLAVYEEGKDNKSAEDEDEGRKLPAMKPGDRVPLERIQAEQHFTQPPPRYTEAAL
VKALEEYGIGRPSTYASIIQTLLFRKYVEMEGRSFRPSDVGRAVSKFLSSHFTRYVDYDF
TAKLEDELDAVSRGEEEWIPLMARFWEPFKELVEDKKESVDRAEASGARELGTDPKTGKP
VSVRLGRFGPYAAIGSTAEDAEEKPKFASLRPGQSMHTISLEDALELFLMPRALGEDKGE
PVSVGIGRFGPFAKRGSTYASLKKEDDPYTIDLARAVFLVEEKEEIARNRIIKEFEGSDI
QVLNGRFGPYISDGKMNGKIPKDREPASLTLAEVQQLMEETGKPVRKGFGAKKAAAKKAP
AKKAAVKKEAAPKKAAAKKAPAKKAPAKKAVKKAAAKKAPAKKAAAKK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacctgctcatcgtcgaatcgccggccaaggccaagacgatcaacaaatac
ctcggcaaggactacacggtcctggcctcgtatgggcacgtgcgcgacctgatcccgaag
gaaggcgcagtcgacccggacaacgggttcgccatgcactacgacgtgatcgacaagaac
gaaaagcatgtcgatgcgatcgccaaggccgccaagggcgccgacgacatcctgctggcg
accgacccggatcgcgagggtgaagcgatcagctggcacatcgccgagatcctgaaggaa
cgcgggctggtcaaggacaagccgatgcagcgcgtggtgttcaccgagatcaccccgcgc
gccatcaaggaagcgatcagccagccgcgcgcgatcgccagcgacctggtcgacgcccag
caggcgcgccgcgcgctggattacctggtcggtttcaacctgtcgccggtgctgtggcgc
aaggtccagcgcggcctgtccgccggccgcgtgcagagcccggcgctgcgcatgatcgtc
gagcgcgaggaagagatcgaagccttcatcgcccgcgaatactggtcgatcgccgccgag
tgcgcgcacccgtcgcagcacttcaacgccaagctgatcaagctggacgggcagaagttc
gaacagttcaccatcaccgacggcgacaccgccgaggccgcccgcctgcgcatccagcag
gccgcgcagggctcgctgcatgtcaccgatgtggccagcaaggagcgcaagcgccgcccg
gcgccgccgttcaccacctccaccctgcagcaggaagcctcgcgcaagctcggcttcacc
acccgcaagaccatgcaggtggcgcagaagctgtatgaaggcgtggcgatcggtgacgaa
ggcaccgtcggcctgatctcgtacatgcgtaccgactcggtgaacctgtcgcaggacgcg
ctggccgagatccgcgacgtgatcgcccgcgactacggcatcgcctcgctgccggaccag
ccgaacacctaccagaccaagtcgaagaacgcccaggaagcgcacgaagcggtgcgcccg
acctcggcgctgcgcacgcctgcgcaggtggcgcgctacctgaccgatgacgagcgcaag
ctgtacgagctgatctggaagcgtgcggtggcctgccagatgattccggccactctcaac
accgtcagcgtcgatctgtccgccggcagcgaacacgtgttccgcgccagcggcaccacc
gtggtggtgcccggcttcctggccgtgtacgaagaaggcaaggacaacaagagcgccgaa
gacgaggacgaaggccgcaagctgccggcaatgaagcccggcgaccgcgtgccgctggaa
cgcatccaggccgaacagcatttcacccagccgccgccgcgctacaccgaagcggcgctg
gtgaaggcgctggaagagtacggcatcggccgtccctcgacctacgcctcgatcatccag
accctgctgttccgcaaatacgtggaaatggaaggccgcagcttccgcccatccgatgtg
ggccgcgcggtgtccaagttcctgtccagccacttcacccggtacgtggactacgacttc
accgccaagctggaagacgagctcgacgccgtctcgcgtggcgaagaagagtggatcccg
ctgatggcccgcttctgggagccgttcaaggagctggtggaagacaagaaggaatcggtc
gaccgtgccgaggccagtggcgcgcgcgagctcggcaccgacccgaagaccggcaagccg
gtcagcgtacgcctcggccgcttcgggccttacgctgccatcggcagcaccgccgaggac
gccgaggagaagccgaagttcgcctcgctgcgccccggccagtcgatgcacaccatctcc
ctggaagacgcgctggagctgttcctgatgccgcgcgcgctgggtgaggacaagggcgag
ccggtcagcgtcggcatcggccgtttcggcccgttcgccaagcgcggcagcacctatgcc
tcgctgaagaaggaagacgacccgtacaccatcgacctggcccgcgccgtgttcctggtc
gaagagaaggaagagatcgcgcgcaaccggatcatcaaggagttcgagggcagcgacatc
caggtgctgaacggccgtttcggcccgtacatcagcgacggcaagatgaacggcaagatc
cccaaggatcgcgagccggcctcgcttaccctggccgaagtgcagcagctgatggaagaa
accggcaagccggtgcgcaagggcttcggcgccaagaaggctgccgcgaagaaggccccg
gcaaagaaggccgcggtgaagaaggaagcggcgccgaagaaggccgctgcaaagaaagcg
cctgccaagaaggccccggcaaagaaagcggtgaagaaggctgctgcgaagaaagccccg
gcgaagaaggccgctgcaaagaagtag
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