Stenotrophomonas sp. ASS1: MG068_20425
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Entry
MG068_20425 CDS
T06051
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
stes
Stenotrophomonas sp. ASS1
Pathway
stes03030
DNA replication
stes03410
Base excision repair
stes03420
Nucleotide excision repair
stes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MG068_20425
03410 Base excision repair
MG068_20425
03420 Nucleotide excision repair
MG068_20425
03440 Homologous recombination
MG068_20425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stes03032
]
MG068_20425
03400 DNA repair and recombination proteins [BR:
stes03400
]
MG068_20425
Enzymes [BR:
stes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MG068_20425
DNA replication proteins [BR:
stes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MG068_20425
DNA repair and recombination proteins [BR:
stes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MG068_20425
NER (nucleotide excision repair)
GGR (global genome repair) factors
MG068_20425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QBL42758
LinkDB
All DBs
Position
complement(4430286..4433060)
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AA seq
924 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLSNAQGEPTGALFGVVNMLRSTLKERPAYVAFVVDAPG
KTFRDDLYDQYKANRPPMPDELRSQVEPMCRIVEALGISILRVPGVEADDVIGTLALQGV
AQDLKVTISTGDKDFAQLVRPGIELVNTMTGSRMDSDAAVMEKFGVRADQIIDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYQHLDGVMAAAPTMKGKIGENLRAALERLPLNRELVTI
RTDVELDAGPTTLALREQDVPALTELYTRYGFTQALKELGAPLPAPAAASEATPSLRGTA
AGFARGSAEAPAAGTLDPALAAPGEYETVLTSEQLQAWVERLQQAELISFDTETDALDAM
RARLVGVSLAVEPGKAAYIPVGHDYPGAPAQLPMQQVLDALRPVLQDPAKKKLGQHGKYD
LHVLRRHGVDVQGYHDDTMLESFVLNSTATRHDMDSLALRYLGYSTIKFEDVAGKGAKQI
PFSQVGIDEASRYAAEDADVTLRLHRALQPQLLAEPALDSVYRDIEMPLVPVLTTIEANG
VRIDTDELRRQSQDLSSRMLAAQQKATELAGRSFNLDSPKQLQAVLFDELKLPAVVKTPK
GQPSTNEEALEAIADQHELPRVILDYRGLAKLRSTYTDKLPEMVNPDTGRVHTSYHQSGA
ATGRLSSSDPNLQNIPIRTEDGRRIRRAFIAPEGFQLLAADYSQIELRIMAHLSEDPGLV
RAFEQGADVHRATAAEVFGRTLEEVTPNERRAAKAINFGLMYGMSAFGLARNLGIDRGQA
QDYVALYFSRYPGVRDFMERMRQQARDQGYVETLFGRRLYLNDIHARNQGLRAGAERAAI
NAPMQGTAADIIKRAMVDVDQWLRDSGAPARMILQVHDELVFETESSFVEELRLQVVERM
SQAAKLRVPLVVDTGIGNNWDEAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtaccgcgcgttccacgcgctg
ccgcccctgtccaatgcacagggcgaacccaccggcgcgctgttcggcgtggtcaacatg
ctgcgctcgacactgaaggagcgcccggcctacgtggcgttcgtggtcgatgcgccgggc
aagaccttccgcgatgacctgtatgaccagtacaaggccaaccgcccgccgatgcccgac
gagctgcgcagccaggtcgaaccgatgtgccgcatcgtcgaagcgctgggcatcagcatc
ctgcgtgttcccggcgtggaggccgatgatgtgatcggcacgctggccctgcagggcgtg
gcacaggacctgaaggtgaccatctccaccggcgacaaggactttgcccagctggtgcgg
ccgggcatcgagctggtcaacaccatgaccggcagtcgcatggattccgatgccgcagtg
atggagaagttcggcgtgcgcgccgaccagatcatcgacctgctggcgctgatgggcgac
accgtcgacaacgtgccgggcgtggagaagtgcgggccgaagaccgctgccaagtggctg
gccgagtaccagcacctggacggggtgatggcggccgcgccgaccatgaagggcaagatc
ggcgagaacctgcgcgccgcgctggagcgcctgccgctgaaccgtgagctggtgaccatc
cgcaccgacgtggagctggacgccggcccgaccacgctggccctgcgcgagcaggacgtg
ccggcgctgaccgagctgtacacgcgctacggcttcacccaggcgctgaaggaactgggt
gcgccgctgccggcgccggctgccgccagcgaggccaccccgagcctgcgcggtaccgcc
gcaggcttcgcccgtggcagtgccgaggcgccagccgctggcacgctggatccggcgctg
gccgcaccgggtgaatacgagaccgtgctgaccagcgagcagctgcaggcctgggtcgag
cgcctgcagcaggccgagctgatcagcttcgacaccgaaaccgatgcgctggacgcgatg
cgcgcgcgcctggtcggcgtcagcctggcggtcgagccgggcaaggcggcctacattccg
gtcggccacgattacccgggtgcgccggcgcagctgccgatgcagcaggtgctggatgcg
ctgcgcccggtgctgcaggacccggccaagaaaaagctgggccagcatggcaagtacgac
ctgcatgtgctgcgccgccacggcgtggacgtgcagggctaccacgatgacaccatgctc
gagagcttcgtgctcaattccaccgccacccgccacgacatggattcgctggccctgcgc
tacctgggctacagcaccatcaagttcgaggacgtggccggcaagggtgccaagcagatt
ccgttctcgcaggtgggcatcgacgaagccagccgctatgcggccgaggacgccgacgtc
accctgcgcctgcaccgcgcgctgcagccgcagctgctggccgagccggcgctggacagc
gtgtaccgcgacatcgagatgccgctggtgccggtgctgaccacgatcgaagccaacggc
gtgcggatcgacaccgacgaactgcgccggcagagccaggacctgtcctcgcgcatgctg
gccgcgcagcagaaggccaccgagctggccggccgcagcttcaacctggattcgcccaag
cagctgcaggcggtgctgttcgatgagctgaagctgccggcggtggtgaagaccccgaag
ggccagcccagcaccaatgaagaggcgctggaggcgatcgccgaccagcacgagctgccg
cgggtgatcctggactaccggggcctggccaagctgcgcagcacctacaccgacaagctg
ccggagatggtcaacccggacaccggccgagtgcataccagctaccaccagtccggtgcc
gccaccggccgcctgtcctcgtcggacccgaacctgcagaacatcccgatccgcaccgag
gatggccgccgcatccgccgcgcgttcatcgccccggagggctttcagctgctggcggcc
gactattcgcagatcgagctgcggatcatggcccacctgtccgaggacccgggcctggtg
cgtgccttcgagcagggcgccgacgtccaccgcgccactgccgccgaggtgttcgggcgc
acgctggaggaagtgaccccgaacgagcgccgcgcggccaaggcgatcaacttcgggctg
atgtacggcatgagcgccttcggcctggcgcgcaacctgggcatcgaccgtggccaggcg
caggactacgtggcgctgtacttcagccgctacccgggcgtgcgtgatttcatggagcgg
atgcgccagcaggcccgcgaccagggctatgtggaaaccctgttcggccgccgcctgtac
ctgaacgacattcatgcacgtaaccagggcctgcgcgccggcgccgagcgcgccgcgatc
aacgcgccgatgcagggcaccgccgcagacatcatcaagcgcgcgatggtggacgtggac
cagtggctgcgtgacagcggtgcaccggcacggatgatcctgcaggtgcacgatgaactg
gtgttcgaaaccgaaagcagtttcgtcgaggagttgcgtttgcaggtggtcgagcgcatg
tcgcaagcggccaaactgcgggtgccgctggtggtcgataccggcatcggcaacaactgg
gacgaagcacactga
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