Stenotrophomonas sp. ASS1: MG068_20490
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Entry
MG068_20490 CDS
T06051
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
stes
Stenotrophomonas sp. ASS1
Pathway
stes03030
DNA replication
stes03430
Mismatch repair
stes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MG068_20490
03430 Mismatch repair
MG068_20490
03440 Homologous recombination
MG068_20490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stes03032
]
MG068_20490
03400 DNA repair and recombination proteins [BR:
stes03400
]
MG068_20490
Enzymes [BR:
stes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MG068_20490
DNA replication proteins [BR:
stes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MG068_20490
DNA repair and recombination proteins [BR:
stes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MG068_20490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF6031
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QBL42771
LinkDB
All DBs
Position
complement(4443788..4444297)
Genome browser
AA seq
169 aa
AA seq
DB search
MSRIVALDTETTGISHRLGHRVIEIGAVELIDGQLTGRQFHTYLQPQRKVDWGAQRVHGI
SDAMLVGKPLFSSKAAELLEFLRGSEMVAHNATFDVGFLDNELRLAGIPGTLAQHCRITC
SLKLARGRWPGQGNKLDDVLQRLRIPGNRGLHGALKDAHLLAQVIPHLR
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcatcgtcgcactggataccgaaaccaccggcatctcccaccgcctggggcac
cgggtgatcgaaatcggtgccgtcgaactgatcgatggccagctcaccggccgccagttc
cacacctacctgcagccgcagcgcaaggtggactggggcgcgcagcgcgtgcacggcatc
agcgacgcgatgctggtgggcaagccgctgttctccagcaaggccgccgagctgctggag
ttcctgcgtggcagcgagatggtcgcgcacaacgccaccttcgatgtgggcttcctggac
aacgagctgcgcctggctggcatccccggcacgctggcccagcattgccgcatcacctgc
agcctgaagctggcgcgcgggcgctggccgggtcagggcaacaagctggacgatgtgctg
cagcgcctgcgtattcccggcaaccgtggcctgcacggcgcgttgaaggatgcccatctg
ctggcccaggtgattccgcatttgcgctga
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