Stenotrophomonas sp. ASS1: MG068_20840
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Entry
MG068_20840 CDS
T06051
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
stes
Stenotrophomonas sp. ASS1
Pathway
stes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MG068_20840 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stes03400
]
MG068_20840 (recC)
Enzymes [BR:
stes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MG068_20840 (recC)
DNA repair and recombination proteins [BR:
stes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MG068_20840 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
NNH6
Motif
Other DBs
NCBI-ProteinID:
QBL42834
LinkDB
All DBs
Position
complement(4533547..4536894)
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AA seq
1115 aa
AA seq
DB search
MMSDPGSDFRLYHSNSLDVLAALLARNVRAPVPGQPLLAPEVVLIPQVAMRRWLQATLAA
EFGVAANLEFLTPGEFVARALKANVSGEQDDLDAAGLHWKLYQALRDPALLAQPPMRALQ
SYLAGDDALKPWALAGELASVFEKYQAWRRDWLLRWAAGADPADPQAILWRTITHGQDYR
ARRIQEYLDRFEGAGQPLPKGLPPRMSAFATLNISPDVLRVMATQARVGELHFYMPTPVQ
SYWGDLQTLAERLRSGAPDPFGEAAGENRLLEAWGAAGRDFMAVLGSYEVVHPAGEIAAY
SDPEDDTRPTLDEGGLSDSLLHRLQRDLFHRRALPSGELRDGLRSDDPSLQVHACHTRLR
ELQVLHDQLRSLLQDPRFDPPLQAREIAVLAPDIDPYVPYLEAVFGGRGGEEEHIPYALA
DSSPLAGEPLADVFVHLLGLPVSRFGLNEVLDLLASAPLAEAAGLEAVDFDRLHGWLQQA
GARWGLDAKHRHQHQAPADDAYTWQFALDRLVLGHATGSEADLAGVAPWIELEGGALDAL
DRLLRLLRVLAIYQRRLGELLTPAQWRQRLLSLLDALLPTAPSSPNSQRALERLRKLLNQ
FAEDATKAGFAEGVPPEVVRAHFAGALGEADTRAPLLTGGISFGRMVPMRLLPFRVICVL
GLNDGDFPRRDPAAGLNQLTAELDTPRRRPGDRSTREDDRFLFLQLFAAAQEVFYLSYLG
ADPRDGSVREPSVLVSELIDAAAAYHLDPPAAVRDFTVRHALQPFSPAAFGDGDPRRFSY
RRQWHPAAGRLTGQRGGLQPWFDAPLPPPLDDAVEDDVALDTLRRFLCDPAGQFLAQSLG
LRLADDVEEVDDLEPLVLSSRGPEKRSVQAAVVRATLSGDTEPLYPRLRARGLLPSGPLG
ERQFEGEQLKTRPYASALLGWMQGEPLESRRYEVDIDGVRLHGRVADRHPEGLVRLRAGT
LNGNAVIRQGLDWLLVNAAGDALPLVQFHDGGDAGPGPHVLPALSAPAARAALRALLQLR
QRGLREPLRFAPYTGWVLYNAPAEKQRSEGWKQWHGSDRSWGESSSDAWQLLLRGADPFA
TDASYAELLRNSQLVFSAVREGRALGADTSQEGNA
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgacccaggcagcgatttccgcctctaccattccaactccctggacgtgctg
gccgcgctgctggcgcgcaatgtgcgggcgcccgttcctggccagccgctgctggcaccg
gaagtggtgctgatcccgcaggtagcgatgcggcgttggctgcaagcgacactggccgcc
gagttcggtgtggctgcgaacctcgaattcctcaccccgggtgagttcgtggcgcgcgcg
ctgaaggccaacgtcagcggcgagcaggacgacctggacgcggccggcctgcattggaag
ctgtaccaggccctgcgcgacccggcgttgctggcgcagccaccgatgcgcgcgctgcag
tcctatcttgccggcgatgacgcattgaagccgtgggcgctggctggcgagctggcctcg
gtgttcgagaagtaccaggcgtggcgccgcgactggctgctgcgctgggccgccggtgcc
gatccagccgacccgcaggcgatcctgtggcgcaccatcacccacggccaggactatcgc
gcgcgccgcatccaggaatacctggaccgtttcgaaggggccggccaacccttgccgaag
ggcttgccaccgcgcatgtctgcgttcgcgacgctcaacatctcacccgatgtgctgcgg
gtgatggccacccaggcacgtgttggcgagctgcacttctatatgcccaccccggtgcag
tcgtactggggcgatctgcagaccctggccgagcgcctgcgcagcggcgcgcccgatccc
ttcggcgaagcagccggcgaaaaccgcctgctggaagcctggggcgcggccgggcgcgac
ttcatggcggtgctgggcagttacgaggtggtgcatccggccggcgaaatcgccgcctat
tccgatccggaggacgacacccggccgaccctggacgaaggcggcctgtccgacagcctg
ctgcatcgcctgcagcgcgatctgttccaccgccgcgcgctgccctcgggcgagctgcgc
gacggcctgcgcagcgacgaccccagcctgcaggtgcacgcctgccatacccgcctgcgc
gagctgcaggtgctgcacgaccagctgcgcagcctgctgcaggacccgcgcttcgacccg
ccgctgcaggcgcgcgagatcgcggtgctggcgccggacatcgatccctacgtgccgtac
ctggaagcggtgttcggcggccgtggtggcgaggaggagcacatcccctatgcgctggcc
gacagcagcccgctggccggtgaaccgctggctgatgtgttcgtgcacttgctgggcctg
cctgtctcgcgctttggcctgaatgaagtgctggacctgctggccagcgcgccgctggcc
gaagcggccgggctggaagcggtggacttcgaccgcctgcatggctggctgcagcaggcc
ggtgcacgctggggcctggatgcgaagcaccgccaccagcaccaggcgccggccgacgac
gcctacacctggcagttcgcgctggatcgcctggtgctcggccatgccaccggcagcgag
gccgacctggccggtgtcgcaccgtggatcgaactggaaggcggcgcgctggacgcgctg
gaccggctgctgcgcctgctgcgcgtgctggccatctaccagcgtcgcctcggcgagctg
ctgaccccggcgcaatggcgacagcgcctgctgtcgttgctggatgcactgctgcccacc
gcgccgagttcacccaacagccagcgcgcgctggagcgcctgcgcaagctgctcaaccag
ttcgccgaggatgctaccaaggccggcttcgcggaaggcgtgccgccggaggtggtacgt
gcgcacttcgccggcgcgctgggcgaggccgatacgcgcgcaccgctgctgaccggtggc
atcagtttcggccgcatggtgccgatgcgactgctgccattccgggtgatctgcgtgctg
ggcctcaatgatggcgatttcccgcgccgtgacccggcggccggtctcaaccagctcacc
gccgaactggacacgccgcgccgccgaccgggcgaccgctccacccgcgaagacgaccgt
ttcctgttcctgcagctgttcgccgccgcgcaggaggtgttctacctcagctacctcggt
gccgatccgcgcgatggcagcgtgcgcgagccgtcggtgctggtcagtgaactgatcgat
gccgccgctgcgtatcacctcgatccgcctgcggcggtccgcgacttcaccgtgcgccat
gccttgcagccgttctcgcccgccgcgttcggtgacggcgacccccgccgcttcagctat
cgccgccagtggcatccggcggccggtcgcctcactggccagcgcggtggactgcagccg
tggttcgacgcaccgctgccaccgccgctcgacgatgcggtggaggacgacgtcgcactc
gataccctgcgccgtttcctgtgcgacccggccggacagttcctcgcacagtcgctgggc
ctgcgcctggccgacgatgtcgaggaggtcgatgacctggaaccgctggtgctgtcatcg
cgcggcccggaaaagcgcagcgtgcaggcggcggtggtgcgtgccacgctcagcggcgat
accgagccgttgtacccgcggctgcgcgcgcgcggcctgctgccgtccggcccattgggc
gagcgccagttcgagggggagcagttgaagacgcgcccgtatgccagtgcgttgctgggc
tggatgcaaggcgaaccgctggaaagccgtcgctacgaagtggacatcgacggcgtgcgc
ctgcatggccgcgtggccgatcggcatcccgagggcttggtgcgcctgcgcgccggtacc
ctcaatggcaatgcagtgatccgccagggcctggactggctgctggtcaacgccgccggc
gatgcgttgccgctggtgcagttccacgatggcggtgacgccggtcccggcccgcatgtg
ctgccagcactgagcgcccccgctgcacgcgccgcgctgcgcgcgctgctgcaattgcgc
cagcgcggcctgcgtgagccgctgcgctttgccccgtataccggctgggtgctgtacaac
gcgccagcagaaaaacagcgtagcgaaggctggaagcagtggcatggcagcgaccgcagc
tggggtgaatccagcagcgacgcctggcagctgctgctgcgcggtgccgacccgtttgcc
accgatgccagctatgccgagctgctgcgcaacagccagctggtcttcagtgcggtgcgt
gaaggccgcgcccttggcgccgacaccagccaggagggcaacgcatga
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