Stenotrophomonas sp. P2112: ACEPA4_06375
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Entry
ACEPA4_06375 CDS
T10817
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
stez Stenotrophomonas sp. P2112
Pathway
stez03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACEPA4_06375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stez03000
]
ACEPA4_06375
03400 DNA repair and recombination proteins [BR:
stez03400
]
ACEPA4_06375
Enzymes [BR:
stez01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ACEPA4_06375
Transcription factors [BR:
stez03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ACEPA4_06375
DNA repair and recombination proteins [BR:
stez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACEPA4_06375
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
CobS_N
Motif
Other DBs
NCBI-ProteinID:
XGK36909
LinkDB
All DBs
Position
complement(1368745..1370223)
Genome browser
AA seq
492 aa
AA seq
DB search
MDTALALDTAACDRARLARDARFDGVFFTAVRSTGIYCRPVCPAPPPKPRNITYFPTAAA
AAAAGYRPCLRCRPELAPQAQQALAGQTVQRALALIHGGFLQEQPVADLATKLGLSARQL
QRLFVEHLGATPGQIHATHRLLLAKQLLTETTLAVTDVALAAGYNSLRRFSTAFLQGCGM
APTALRRQHQPLAADDGGLVLRLGYRPPLDFPRMLAFLRKRSLPGIELIGEDSYQRVLGA
PERPTLLRVTADSKRPELRLQLGAVDPRLIPDIVRRVRRVFDLDADLQQVHAALGEEPLL
ARGIAERPGLRVPGGWDGFEVGVRAVLGQQVSVAAATTFARRLVDAYGAHLPGMPSDFDR
QFPAPEVLAEAPLESIGLPRSRAATVRALAAACASSRLDFGPGQALEEFVARCVALPGIG
PWTAQYIALRGLGQPDAFPAGDLVLQQVLGHAQGQRLNERATEARSQPWRPWRAYAVLHL
WHLSGTFVGEPT
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgccctcgccctcgacaccgccgcctgcgaccgcgcccgcctggcccgcgac
gcacgcttcgacggcgtgttcttcaccgccgtgcgcagcaccggcatctactgccgcccg
gtgtgcccggcaccgccgccgaagccgcgcaacatcacctacttccccaccgccgcggcc
gccgcggccgccgggtaccgcccctgcctgcgctgccgcccggaattggcaccgcaggcc
cagcaggccctggccggacagaccgtgcagcgcgcactggcgctgatccacggcggcttc
ctgcaggagcagccggtggccgatcttgcaacgaagctcggcctcagcgcgcgccaactg
cagcgcctgttcgtcgaacatctcggcgcaacgcccgggcagatccacgcaacccatcgc
ctgttgctggccaaacagttgctgaccgaaaccacgctggcggtgaccgacgtcgcgctg
gctgccggctacaacagcctgcgccgcttcagtaccgcgttcctgcagggctgtgggatg
gcgccgaccgccctgcgtcgccagcatcaaccgttggctgcagatgatggcggcctggtg
ctgcgcctgggctaccgtccaccactggacttcccacgcatgctggccttcctgcgcaaa
cgcagcctgcccggcatcgaactgatcggtgaagacagctaccagcgcgtattgggcgcg
ccggagcgccccaccctgctgcgcgtcaccgccgattcgaagcgcccggaacttcgcctg
caattgggcgcggtggatccgcgcttgatccctgacatcgtgcgccgcgtgcgtcgcgtg
ttcgatctggatgccgacctgcagcaggtgcatgccgcgctcggcgaggaacctctgctg
gcgcgcgggatcgccgagcgccccgggctgcgcgtgcccggcggctgggatggcttcgag
gtgggcgtacgcgcggtgctcgggcagcaggtcagcgtggccgcggccaccaccttcgcg
cggcgcctggtcgacgcctatggcgcgcacctgccgggcatgccatccgacttcgatcgc
cagtttccagcgcccgaggtactggccgaggcaccattggagtcaatcggcctgccgcgc
agccgcgccgccaccgtgcgcgccctggccgccgcctgcgccagcagccggctcgacttc
gggcccggccaggccttggaggaattcgttgcgcgctgcgttgcactgcccggcatcggc
ccctggaccgcgcagtacatcgccctgcgtggcctcggccagcccgatgccttcccggcc
ggcgatcttgtactgcagcaggtgctcggccacgcgcagggccagcgcctgaacgaacgc
gcgaccgaagcgcgctcgcaaccctggcgcccgtggcgcgcctacgcggtgctgcacctg
tggcacctgtccggcacgttcgttggagaaccgacatga
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