Stenotrophomonas sp. P2112: ACEPA4_06545
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Entry
ACEPA4_06545 CDS
T10817
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
stez Stenotrophomonas sp. P2112
Pathway
stez03030
DNA replication
stez03430
Mismatch repair
stez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACEPA4_06545 (dnaE)
03430 Mismatch repair
ACEPA4_06545 (dnaE)
03440 Homologous recombination
ACEPA4_06545 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stez03032
]
ACEPA4_06545 (dnaE)
03400 DNA repair and recombination proteins [BR:
stez03400
]
ACEPA4_06545 (dnaE)
Enzymes [BR:
stez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACEPA4_06545 (dnaE)
DNA replication proteins [BR:
stez03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACEPA4_06545 (dnaE)
DNA repair and recombination proteins [BR:
stez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACEPA4_06545 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Ferredoxin_N
Motif
Other DBs
NCBI-ProteinID:
XGK36943
LinkDB
All DBs
Position
complement(1406204..1409794)
Genome browser
AA seq
1196 aa
AA seq
DB search
MSNSRFVHLHVHTEFSLADSTIRVPAKPDQADPKKAKQANLLSRSVELGLPALAVTDLNN
LFALVKFYKAAEGVGIKPIAGADVLIAEEGQDPWRMTLLCRDREGYLSLSRLLTRAWMEG
HRPEGGVAIHPDWLKAGNANLFALAGRQSLAGRLALDGKHELAEQQLADWQRVFGDGLHL
ELTRTGREGEETFNQFALMAAGQRGLPVVASNDVRFLSPSDFSAHEARVCISTGRVLDDP
KRPREYSDQQYLKSAEEMCALFADIPDAIDNTLALAERCNIEMRLGTYFLPNYPVPDDET
LDTWIQKMSRDGLEERLAKNPLAPGKTREEYFERLEFELNTIIKMGFPGYFLIVADFIQW
GKNQGIPIGPGRGSGAGSLVAWALKITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDR
RDEVIDYVARKYGRERVSQIITYGTMAAKAVVRDSGRVLGFPYGLVDGVSKLIPNILGIH
LKDALGKGKEGPSSEMASPELIQRYETEDDVRDLIDLALQLEDLTRNAGKHAGGVVIGPE
PLSEFCPLYAEHDENGLGKNPVTQFDKNDVEEVGLVKFDFLGLRTLTIIDWAVKAINKRH
ERAGIPPVDIAAIPLDDAPTYKDIFANGNTGAVFQFESSGMRRLLKDARPDRFEDLIALV
SLYRPGPMDLIPSFNARKHGQEEIIYPDPRTEAILKDTYGIMVYQEQVMQMAQIVGGYSL
GGADLLRRAMGKKVPAEMAKHREIFREGAAKGGVDGPKADEIFDLMEKFAGYGFNKSHAA
AYALVSYQTAWLKRHYPAEFMAATLSSDLDNTDKVVGFLDEVRNLGLTVLPPKVNQSAFM
FEAVTPDTIQYGLGAIKGVGQGACEAVVEERLKGGPFKDLLDFCTRVGSAKLNRRTLEAM
INCGALDELGRNRASLMLQLPEVIKATDQMARERASGQNSLFGGPDPSTVSIQLDLPEAE
EWPLLQRLNGERDTLGFYLSGHPFDPWRDDVRDLVGNDLGSVEKIWSANSGGGGGGEKRW
RPEVQTVLAGQVVGVRRKGESQIFIQLEDGRGRVECSAFSDAMAEFGHLMTKDRILVVKG
GLREDEFNGGYALRIRQCWDFDEVCANYATRLSLRLDLRQQRPVWERINALLDRHRPGRT
PLRLDLLLKGPHGGVAGMLDVSGQSAVRIDSKLMEALRADPAVRTLKVRYSPPWAS
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtccaactcccgcttcgtacatctccacgtccacaccgagttctcgctggcggactcg
accatccgcgtgccggccaagccggaccaggcggacccgaagaaggccaagcaggccaac
ctgctgtcgcgctcggtggagctcggcctgcccgcgctggcggtgaccgatctcaacaac
ctgttcgccctggtcaagttctacaaggccgccgaaggcgtgggcatcaagccgatcgcc
ggtgccgacgtgctgatcgccgaggaaggccaggacccgtggcggatgaccctgctgtgc
cgcgaccgcgagggctacctgagcctgtcgcggttgctgacccgcgcctggatggaaggc
catcgcccggaaggcggtgtggccatccacccggactggctgaaggccggcaacgccaac
ctgttcgcgctggccggacggcagagcctggccgggcgcctggcactggacggcaagcat
gaactggccgagcagcagctggccgactggcagcgcgtgttcggcgatggcctgcacctg
gagctgacccgtaccggccgcgagggcgaggaaaccttcaaccagttcgcgctgatggcc
gccggccagcgcggcctgccggtggtcgccagcaatgacgtgcgcttcctgtcgccgtcg
gatttcagcgcgcacgaagcgcgcgtgtgcatttccaccggccgcgtgctggacgatccc
aagcgcccgcgcgagtacagcgaccagcagtacctgaagtcggccgaggagatgtgcgcg
ctgttcgccgacatccccgatgcgatcgacaacacgctggcgctggccgagcgctgcaac
atcgagatgcggctgggcacctacttcctgcccaactacccggtgcccgacgacgagacc
ctggacacctggatccagaagatgtcgcgcgatggcctggaagagcgcctggcgaagaat
ccgctggcgccgggcaagacccgtgaggagtacttcgagcgcctggagttcgagctcaac
accatcatcaaaatgggcttccccggctacttcctgatcgtggccgacttcatccagtgg
ggcaagaaccagggcatcccgatcggtcccggccgtggttcgggtgccggctcgctggtg
gcgtgggcgctgaagatcaccgacctggacccgctgccgtacaacctgctgttcgagcga
ttcctgaacccggaacgcgtgtcgatgcccgacttcgacatcgacttctgcatggaccgc
cgcgacgaggtgatcgactacgtcgcgcgcaagtacgggcgcgagcgcgtcagccagatc
atcacctacggcaccatggccgcaaaggcggtggtgcgcgactccggccgcgtgctcggg
ttcccgtacggcctggtggatggcgtttccaagctgatccccaacatcctgggcatccac
ctgaaggatgcgctgggcaagggcaaggaaggcccaagttcggaaatggcgtcgccggaa
ctgatccagcgctacgagaccgaggacgatgtccgcgacctgatcgacctggcgctgcag
ctggaagacctgacccgcaacgccggcaagcatgccggcggcgtggtgatcgggcccgag
ccgctgagcgagttctgcccgctgtacgccgaacacgacgagaacggcctgggcaagaac
ccggtcacccagttcgacaagaacgacgtggaagaagtgggcctggtgaagttcgacttc
ctcggcctgcgcacgctgaccatcatcgactgggcggtgaaggcgatcaacaagcgccac
gaacgcgcgggcattccgccggtcgacattgccgcgatcccgctcgacgatgcgcccacc
tacaaggacatcttcgccaacggcaacaccggcgcggtgttccagttcgaatcctcgggc
atgcgccgcctgctgaaggacgcgcgccccgaccgcttcgaagacctgatcgcgctggtg
tcgctgtatcgccccggcccgatggacctgattccctccttcaacgcgcgcaagcacggc
caggaagagatcatctatcccgatccgcgcaccgaagcgatcctgaaggacacctacggc
atcatggtgtatcaggagcaggtgatgcagatggcgcagatcgtcggcggctactcgctg
ggcggcgctgacctgctgcgacgcgcgatgggcaagaaggtgccggcggaaatggccaag
caccgcgagatcttccgcgaaggcgcagccaagggcggcgtcgacggccccaaggccgac
gaaatcttcgacctgatggagaagttcgccggctatggcttcaacaagtcgcacgccgct
gcatacgcactggtcagctaccagaccgcctggctgaagcgccattacccggccgagttc
atggcggccacgctgtcttcggacctggacaacaccgacaaggtggtcggcttcctcgac
gaggtgcgcaacctcggcctgaccgtgctgccgccgaaggtgaaccagtcggccttcatg
ttcgaagcggtcacaccggacacgatccagtacggcctgggcgcgatcaagggcgtcggg
cagggcgcctgcgaagcagtggtcgaggaacgactgaagggcggaccgttcaaggatctg
ctggacttctgcacccgcgtcggctcggccaagctcaaccggcgcacgctggaagcgatg
atcaactgtggcgcgctcgatgagctcggccgcaaccgtgcctcgctgatgctgcagctg
ccggaagtgatcaaggccaccgaccagatggcacgtgagcgtgcgtccgggcagaattcg
ctgtttggcgggcccgatccgagcaccgtgtcgatccagctggacctgcccgaagccgaa
gaatggccgctgctgcagcgcctcaacggcgagcgcgacacgctgggcttctacctcagc
ggccacccgttcgatccctggcgcgacgatgtgcgcgacctggtcggcaacgacctgggt
tcggtggagaagatctggagcgccaacagcggcggcggcggtggcggcgagaagcgctgg
cgcccggaagtgcagaccgtgctggccggccaggtggtcggcgtgcgccgcaagggtgag
agccagatcttcatccagctggaggacggtcgcggccgcgtggagtgcagcgcgttctcc
gatgcgatggccgagttcggccacctgatgaccaaggaccgcatcctggtggtcaagggc
ggcctgcgcgaggacgaattcaacggcggctacgcactgcgcatccgccagtgctgggac
ttcgacgaagtctgcgccaactacgccacgcggttgtcgttgcgcctggacctgcgccag
cagcgcccggtctgggagcgcatcaatgccctgctcgaccgccatcgcccggggcggacg
ccgctgcgcctggacctgctgctgaagggcccgcacggcggtgtcgccggcatgctggat
gtctccgggcagagcgcagtgcgcatcgattccaagctgatggaggcgctgcgcgccgac
cccgccgtgcgtacgctgaaggtgcgctacagcccgccgtgggccagctga
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